Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006399.1 Hibiscus syriacus cultivar Beakdansim tig00015422_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58845

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1772--1826
28
2.0
28
92
0
92
41
12
23
21
1.88
13612--13701
43
2.2
41
80
17
109
57
2
5
34
1.34
13625--13747
43
3.0
41
80
18
134
55
4
5
34
1.43
14282--14308
14
1.9
14
100
0
54
14
0
25
59
1.36
20051--20077
2
13.5
2
100
0
54
51
0
0
48
1.00
23944--24126
60
3.1
58
80
10
158
33
20
4
41
1.72
23989--24127
60
2.3
60
86
6
185
34
23
3
38
1.72
24256--24412
60
2.6
60
85
2
199
42
4
20
33
1.72
24659--24710
10
5.2
10
97
0
95
40
30
0
28
1.57
24659--24710
5
10.4
5
82
0
68
40
30
0
28
1.57
33356--33427
24
3.0
24
82
8
101
52
18
11
18
1.73
33356--33464
48
2.3
48
82
6
123
49
16
13
20
1.79
35042--35197
31
5.0
31
92
1
251
37
22
19
20
1.95
36066--36111
21
2.2
21
88
0
65
15
26
28
30
1.96
39261--39416
31
5.0
31
92
1
251
37
22
19
20
1.95
40284--40329
21
2.2
21
88
0
65
15
26
28
30
1.96
46877--46937
29
2.1
29
81
6
70
45
4
0
49
1.23
50920--50958
12
3.2
12
92
0
60
20
0
38
41
1.53
56546--56682
72
1.9
72
95
0
247
31
16
13
38
1.87
58709--58740
16
2.0
16
100
0
64
18
25
0
56
1.42

Tables:   1

The End!