Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006409.1 Hibiscus syriacus cultivar Beakdansim tig00015454_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41099

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
740--789
23
2.2
23
89
3
75
22
40
20
18
1.92
741--811
21
3.3
22
82
9
83
22
35
22
19
1.96
772--816
21
2.2
20
84
7
56
22
28
33
15
1.95
11367--11414
17
2.7
18
87
6
62
58
0
0
41
0.98
11374--11414
9
4.7
9
81
6
57
58
0
0
41
0.98
12200--12336
21
6.6
21
75
9
129
35
26
20
18
1.95
12197--12293
20
4.8
20
76
8
97
39
24
20
15
1.91
12197--12481
41
7.0
41
76
8
267
35
24
21
19
1.96
12372--12477
20
5.2
20
67
12
63
35
26
19
17
1.95
13859--13892
14
2.4
14
86
13
52
67
5
0
26
1.13
15077--15133
24
2.3
25
84
9
80
40
12
5
42
1.65
19181--19213
14
2.4
14
85
5
50
66
6
0
27
1.15
35590--35664
2
37.5
2
100
0
150
49
0
0
50
1.00

Tables:   1

The End!