Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006414.1 Hibiscus syriacus cultivar Beakdansim tig00015469_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  56831

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2548--2637
35
2.4
38
89
5
132
40
12
6
41
1.69
17241--17498
95
2.7
95
88
5
362
32
18
18
30
1.95
18630--19418
84
9.4
84
83
4
885
31
25
18
24
1.97
18630--19422
252
3.1
250
85
2
1032
32
25
18
24
1.97
20006--20042
13
2.5
15
84
16
51
43
0
2
54
1.14
21039--21138
17
6.4
16
72
15
52
13
9
3
75
1.16
21047--21138
22
4.6
21
74
16
88
13
8
3
75
1.16
21073--21122
24
2.1
23
81
3
55
14
10
0
76
1.03
21096--21166
37
1.9
37
82
2
90
16
7
2
73
1.18
21083--21166
36
2.3
35
81
6
87
15
7
2
75
1.13
21030--21154
58
2.2
56
80
11
137
15
7
3
74
1.16
21143--21245
6
17.2
6
74
10
52
13
7
4
73
1.21
21170--21259
45
1.9
49
82
8
116
14
5
6
73
1.22
25835--26051
110
2.0
110
95
0
389
32
9
21
36
1.85
26802--26841
15
2.7
15
92
0
62
42
5
5
47
1.47
27065--27104
20
2.1
19
86
9
55
27
0
7
65
1.20
34258--34300
15
2.9
15
89
0
59
65
2
32
0
1.06
37878--37955
29
2.7
29
91
2
120
33
15
8
42
1.78
42624--42704
29
2.8
29
94
0
135
32
14
11
41
1.81

Tables:   1

The End!