Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006417.1 Hibiscus syriacus cultivar Beakdansim tig00015482_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  67829

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1324--1403
30
2.8
27
77
7
70
26
10
10
53
1.65
5277--5406
63
2.1
63
91
0
206
55
20
7
16
1.65
8354--8406
20
2.7
19
91
2
79
33
30
16
18
1.94
10388--10426
21
1.9
20
85
15
53
51
2
10
35
1.50
17033--17120
45
1.9
46
88
2
133
27
22
19
30
1.98
17943--18005
21
3.0
21
92
0
99
25
15
28
30
1.96
18980--19082
38
2.6
37
74
8
98
27
28
18
26
1.98
19043--19082
20
2.0
20
85
0
53
27
30
17
25
1.97
22045--22087
21
2.0
21
95
0
77
16
25
32
25
1.96
22550--22593
2
22.0
2
100
0
88
50
0
0
50
1.00
25335--25424
40
2.3
40
80
1
110
38
5
5
50
1.49
30784--30863
35
2.3
35
95
0
142
47
27
2
22
1.64
40124--40182
25
2.4
25
100
0
118
44
3
6
45
1.47
47490--47523
18
1.9
17
88
5
50
64
8
2
23
1.36
48402--48435
9
3.8
9
88
0
50
14
8
0
76
1.01
51713--51780
15
4.5
15
78
10
66
64
1
7
26
1.28
60203--60230
6
4.7
6
100
0
56
82
0
0
17
0.68

Tables:   1

The End!