Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000642.1 Hibiscus syriacus cultivar Beakdansim tig00001242_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  88049

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
241--271
14
2.2
14
100
0
62
35
12
16
35
1.87
275--320
2
23.5
2
95
4
85
50
0
0
50
1.00
564--599
13
2.8
13
86
0
54
44
8
2
44
1.48
921--1043
54
2.3
54
92
0
201
31
25
19
23
1.98
3567--3699
60
2.2
60
80
7
137
36
17
13
33
1.89
9444--9468
11
2.3
11
100
0
50
68
0
0
32
0.90
10201--10245
23
2.0
23
90
0
72
24
26
26
22
2.00
10213--10527
149
2.1
149
98
1
605
33
21
18
26
1.96
11417--11451
18
1.9
18
88
11
54
22
17
5
54
1.64
12032--12076
21
2.1
21
87
0
63
15
24
28
31
1.96
15327--15371
23
2.0
23
90
0
72
24
26
26
22
2.00
15339--15653
149
2.1
149
97
1
596
33
21
18
26
1.96
16540--16574
18
1.9
18
88
11
54
22
17
5
54
1.64
17154--17198
21
2.1
21
87
0
63
15
24
28
31
1.96
18393--18422
14
2.1
15
93
6
53
53
0
0
46
1.00
18389--18452
24
2.7
24
79
15
71
54
1
0
43
1.09
24282--24320
18
2.2
18
85
0
51
7
25
30
35
1.84
25903--25984
23
3.7
22
87
4
103
18
26
31
23
1.97
28225--28430
76
2.7
76
87
3
283
23
32
23
20
1.98
34212--34271
21
2.8
21
85
10
68
23
35
25
16
1.95
36203--36252
9
6.1
8
76
19
50
14
0
28
58
1.37
36204--36247
17
2.6
17
85
7
63
13
0
29
56
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36852--37062
75
2.8
76
84
4
264
23
32
23
20
1.98
39566--39605
21
1.9
21
85
10
55
35
7
2
55
1.42
46159--46199
17
2.4
17
95
0
73
7
14
26
51
1.69
46559--46646
31
2.8
31
92
0
149
45
5
2
46
1.39
49369--49410
15
2.8
15
81
0
57
45
0
0
54
0.99
49327--49412
38
2.3
37
84
5
120
47
0
0
52
1.00
49518--49586
25
2.8
25
84
4
86
26
4
33
36
1.76
50008--50272
134
2.0
128
95
4
476
49
11
5
33
1.62
69246--69292
25
1.9
24
82
4
58
42
2
6
48
1.40
69679--69739
20
2.9
20
82
7
68
18
22
32
26
1.97
75037--75089
26
2.0
26
96
0
97
20
15
28
35
1.93
76466--76491
3
8.7
3
100
0
52
65
0
0
34
0.93
79376--79408
3
11.3
3
93
6
59
30
0
0
69
0.88
86737--86895
64
2.5
64
82
10
182
28
22
17
30
1.97

Tables:   1

The End!