Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006422.1 Hibiscus syriacus cultivar Beakdansim tig00015495_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49264

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4475--4508
18
1.9
18
88
5
52
38
5
17
38
1.74
6836--6868
17
1.9
17
100
0
66
42
21
12
24
1.86
9231--9280
23
2.2
23
82
7
57
56
12
20
12
1.67
9525--9573
2
24.5
2
100
0
98
51
0
0
48
1.00
18854--18988
65
2.1
65
98
0
261
35
29
17
17
1.93
21806--21861
19
2.9
19
85
12
78
16
21
28
33
1.95
21806--21854
10
4.8
11
83
16
70
16
20
26
36
1.93
21807--21861
9
5.6
10
83
12
78
14
21
29
34
1.93
21866--21894
8
3.6
8
100
0
58
13
41
13
31
1.84
21864--21924
13
4.7
13
77
20
65
14
45
18
21
1.84
26190--26338
60
2.5
59
84
5
185
41
2
22
33
1.68
26241--26372
60
2.2
60
82
2
149
43
3
19
32
1.69
31807--31837
15
2.1
15
100
0
62
41
12
0
45
1.42
44560--44589
15
2.0
15
100
0
60
46
6
0
46
1.29
44615--44670
30
1.9
28
86
13
78
32
3
12
51
1.56

Tables:   1

The End!