Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006428.1 Hibiscus syriacus cultivar Beakdansim tig00015517_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61266

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
577--652
20
3.8
20
87
0
116
15
18
25
40
1.90
691--821
61
2.1
62
87
7
185
49
17
0
32
1.52
2192--2290
21
4.7
21
74
8
85
22
19
35
23
1.96
2172--2290
42
2.8
42
75
5
114
22
20
35
21
1.96
2242--2297
21
2.7
20
71
20
51
26
14
33
25
1.94
4428--4478
20
2.5
20
93
0
84
52
19
21
5
1.66
4832--4924
43
2.2
43
98
0
177
26
3
37
32
1.73
4986--5153
20
8.4
20
77
6
171
20
15
22
41
1.89
4986--5164
40
4.5
39
85
6
234
20
15
23
41
1.89
4999--5164
79
2.1
80
87
3
237
20
14
24
40
1.89
4986--5184
40
5.0
39
83
10
217
20
15
23
40
1.90
4999--5184
79
2.3
80
85
6
227
20
15
23
40
1.90
5158--5204
20
2.3
20
85
0
58
25
14
23
36
1.93
5250--5303
20
2.7
19
75
8
63
24
14
33
27
1.94
15663--15720
29
2.0
29
89
0
89
36
6
20
36
1.80
19910--19968
29
2.0
29
96
0
109
35
10
8
45
1.68
24307--24382
8
9.8
8
70
24
56
39
2
1
56
1.21
24323--24391
23
3.1
22
76
19
72
42
4
0
53
1.20
27523--27571
22
2.2
22
96
0
89
30
14
24
30
1.94
28919--28950
2
16.0
2
100
0
64
50
0
0
50
1.00
34487--34537
2
26.5
2
76
7
52
49
1
0
49
1.12
35809--35837
7
4.1
7
100
0
58
0
27
0
72
0.85

Tables:   1

The End!