Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006442.1 Hibiscus syriacus cultivar Beakdansim tig00015562_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47134

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2792--2872
34
2.3
35
83
12
105
29
2
37
30
1.71
7751--7793
18
2.4
18
100
0
86
32
0
32
34
1.58
8474--8562
11
7.8
11
67
23
51
28
2
37
32
1.70
8461--8529
33
2.1
33
86
5
95
30
1
36
31
1.67
10066--10108
23
1.9
21
81
13
50
32
18
13
34
1.90
12195--12262
33
2.1
33
83
5
84
30
1
36
30
1.67
16457--16524
33
2.1
33
83
5
84
30
1
36
30
1.67
25589--25691
34
3.0
34
80
9
95
31
1
35
31
1.69
25611--25691
34
2.3
35
83
12
105
29
2
37
30
1.71
28550--28650
36
2.9
36
91
4
161
32
36
4
25
1.78
28551--28689
33
4.1
34
76
13
117
30
36
2
29
1.72
29086--29140
25
2.2
25
90
3
85
32
36
1
29
1.68
29090--29139
13
4.0
12
82
17
66
32
38
2
28
1.68
28459--29479
495
2.0
502
85
9
1368
28
26
9
35
1.89
31011--31053
21
2.0
22
86
4
61
25
23
18
32
1.97
32974--33042
33
2.1
33
83
5
86
31
1
36
30
1.67
33028--33113
13
7.2
12
72
22
58
29
3
37
30
1.74
33013--33114
36
2.9
36
94
1
170
26
4
36
32
1.78
38358--38446
11
7.8
11
67
23
51
28
2
37
32
1.70
38345--38413
33
2.1
33
86
5
95
30
1
36
31
1.67
39943--39985
23
1.9
21
81
13
50
32
18
13
34
1.90
42075--42142
33
2.1
33
83
5
84
30
1
36
30
1.67
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46336--46403
33
2.1
33
83
5
84
30
1
36
30
1.67

Tables:   1

The End!