Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006450.1 Hibiscus syriacus cultivar Beakdansim tig00015626_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65844

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2486--2544
28
2.1
28
90
6
93
47
11
13
27
1.78
7151--7210
29
2.1
28
96
3
111
48
10
13
28
1.74
8245--8327
42
2.0
42
92
0
139
39
27
16
15
1.89
8198--8317
21
5.8
21
79
7
122
37
25
18
19
1.94
8998--9025
7
4.0
7
100
0
56
42
0
14
42
1.45
9288--9342
21
2.6
21
97
0
101
16
12
32
38
1.86
9288--9380
21
4.6
20
81
10
82
18
13
32
35
1.90
10525--11052
140
3.8
140
83
5
656
42
12
14
30
1.83
15317--15346
14
2.1
14
100
0
60
20
13
30
36
1.90
23670--23736
12
5.6
12
74
13
66
20
8
32
37
1.84
23663--23738
24
3.2
24
92
0
125
19
7
31
40
1.80
25259--25307
24
2.0
24
100
0
98
8
42
16
32
1.77
26697--26751
26
2.1
26
96
0
101
32
9
20
38
1.84
35436--35615
90
2.0
90
80
2
200
30
9
17
42
1.81
39613--39665
20
2.6
20
77
11
54
49
3
0
47
1.19
39774--39818
24
1.9
24
86
4
65
51
4
0
44
1.21
45334--45401
34
2.0
35
88
2
102
47
2
7
42
1.46
45488--45542
29
2.0
28
85
7
76
47
3
0
49
1.19
45846--45888
6
7.2
6
94
0
68
16
0
67
16
1.24
57471--57888
134
3.1
134
85
5
529
32
22
15
28
1.95
57675--57932
143
1.8
143
85
6
371
33
24
13
27
1.94
62239--62363
47
2.8
45
84
7
155
41
6
19
32
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
64123--64174
2
26.0
2
100
0
104
50
0
0
50
1.00

Tables:   1

The End!