Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006451.1 Hibiscus syriacus cultivar Beakdansim tig00015627_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  58902

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25098--25175
26
3.0
26
75
14
81
60
2
1
35
1.19
25292--25332
21
2.0
21
90
9
66
53
7
2
36
1.42
26190--26262
20
3.6
20
81
3
92
34
20
17
27
1.95
39541--39717
90
2.0
89
91
3
284
44
6
12
36
1.69
42509--42549
2
20.5
2
100
0
82
48
0
0
51
1.00
44324--44448
47
2.8
45
84
7
155
32
19
6
41
1.76
48796--49163
134
2.7
140
84
7
498
28
16
22
33
1.95
48887--49217
134
2.5
134
87
0
482
29
16
21
32
1.95
49116--49267
48
3.2
48
67
9
132
32
15
20
32
1.93
49401--49797
192
2.1
191
89
2
618
33
15
18
32
1.92

Tables:   1

The End!