Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006463.1 Hibiscus syriacus cultivar Beakdansim tig00015662_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  91064

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6189--6228
21
1.9
21
89
0
62
25
25
27
22
2.00
14024--14121
28
3.4
28
87
5
133
42
33
9
14
1.77
14015--14223
32
6.4
33
73
15
175
42
31
9
16
1.80
14184--14252
28
2.5
28
85
0
93
43
30
10
15
1.80
14233--14315
31
2.6
32
86
1
123
39
24
10
25
1.87
31834--31887
24
2.2
24
90
0
81
37
16
14
31
1.89
38201--38322
35
3.4
36
79
6
131
33
4
16
45
1.69
42177--42290
33
3.3
35
80
8
133
32
4
17
45
1.68
44205--44242
16
2.4
16
95
0
67
34
2
23
39
1.69
60688--60878
96
2.0
96
81
2
222
40
17
12
29
1.85
64593--64625
16
2.0
17
88
5
50
42
0
3
54
1.15
64597--64634
11
3.5
11
85
3
51
39
0
2
57
1.12
65741--65775
10
3.5
10
85
14
54
34
25
0
40
1.56
68882--69008
51
2.5
50
83
7
150
22
29
33
14
1.94
80700--80870
6
28.7
6
94
1
299
33
47
0
19
1.50
83429--83466
2
19.0
2
94
0
67
0
47
2
50
1.15
86061--86196
50
2.6
53
79
6
154
38
9
12
39
1.76
86037--86192
50
3.0
51
74
10
149
38
9
14
37
1.78

Tables:   1

The End!