Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006475.1 Hibiscus syriacus cultivar Beakdansim tig00015693_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68198

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11264--11304
16
2.3
18
84
12
50
53
0
0
46
1.00
12430--12476
2
23.0
2
95
4
85
48
2
0
48
1.13
12877--12918
16
2.7
15
85
10
57
28
2
2
66
1.16
13082--13147
21
3.0
21
84
4
78
15
16
12
56
1.68
13109--13155
21
2.3
21
85
3
69
12
23
17
46
1.82
16912--16949
19
2.0
20
89
5
60
57
0
2
39
1.12
17526--17560
18
1.9
18
88
0
52
25
0
5
68
1.11
18544--18646
49
2.1
49
94
1
181
53
1
7
36
1.41
18544--18646
25
4.2
26
79
13
121
53
1
7
36
1.41
26263--26406
60
2.4
60
78
4
141
31
22
6
39
1.79
27303--27329
2
13.5
2
100
0
54
48
0
51
0
1.00
31066--31254
100
1.9
100
95
0
342
30
17
16
35
1.92
33406--33455
21
2.3
23
86
6
68
60
4
0
36
1.16
39883--39920
17
2.2
17
90
0
58
23
28
21
26
1.99
44716--44740
2
12.5
2
100
0
50
52
0
0
48
1.00
45635--45798
85
1.9
84
85
7
224
29
18
20
31
1.96
45778--45811
13
2.6
13
95
0
59
35
11
17
35
1.87
48106--48298
41
4.7
41
74
10
187
32
13
21
32
1.93
48106--48299
82
2.4
82
92
1
318
32
13
21
32
1.92
63406--63604
41
4.9
41
78
7
194
36
17
17
29
1.93
63396--63601
80
2.5
80
81
7
229
37
17
16
28
1.92
63467--63650
82
2.3
82
81
6
196
33
17
17
30
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
67743--67785
16
2.6
17
74
7
52
44
0
0
55
0.99

Tables:   1

The End!