Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006491.1 Hibiscus syriacus cultivar Beakdansim tig00015787_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65082

Tables:   1   

This is table  1  of  1  ( 35 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4359--4409
21
2.4
22
83
6
61
70
0
7
21
1.12
5853--6017
26
7.1
25
67
23
128
43
10
23
23
1.84
5853--6060
46
4.5
46
89
4
307
44
9
22
23
1.82
5848--6052
91
2.2
92
88
5
324
45
9
21
22
1.81
6777--6889
27
4.2
27
80
0
118
42
1
15
39
1.58
6785--6887
54
1.9
54
84
4
136
40
1
15
41
1.58
9003--9027
13
1.9
13
100
0
50
80
12
0
8
0.92
11589--11623
3
11.7
3
100
0
70
31
0
0
68
0.90
23726--23760
14
2.4
15
95
4
63
0
14
0
85
0.59
31354--31396
20
2.2
20
91
0
68
34
20
11
32
1.89
36176--36239
20
3.1
20
84
8
92
18
40
28
12
1.87
36176--36239
22
3.0
22
88
4
96
18
40
28
12
1.87
41254--41283
8
3.8
8
100
0
60
46
0
26
26
1.53
42056--42122
2
33.5
2
100
0
134
50
0
0
49
1.00
42976--43000
13
1.9
13
100
0
50
32
12
16
40
1.84
44576--44649
21
3.5
21
100
0
148
44
14
13
27
1.83
44588--44648
12
5.6
12
70
21
62
42
14
14
27
1.85
44865--45012
77
1.9
77
94
0
260
43
15
8
31
1.77
58914--58955
20
2.2
19
86
4
57
64
2
0
33
1.07
58827--59059
120
2.0
120
82
5
285
46
9
7
36
1.64
59105--59140
18
1.9
18
88
5
54
50
0
0
50
1.00
59215--59278
27
2.3
27
81
7
76
64
4
6
25
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
60548--60595
3
15.3
3
78
8
51
58
0
0
41
0.98
60558--60603
22
2.1
22
88
8
67
52
0
0
47
1.00
60529--60600
19
3.9
19
76
20
66
54
0
0
45
0.99
60723--61225
76
6.6
76
94
0
846
34
22
19
23
1.97
61124--61324
102
2.0
102
93
0
348
34
21
21
22
1.97
61226--62369
76
15.2
76
94
1
1984
34
22
19
23
1.96
60972--61478
253
2.0
254
94
1
883
33
21
20
23
1.97
60896--61554
329
2.0
330
94
0
1167
33
22
20
23
1.97
60820--61630
405
2.0
405
95
0
1462
34
22
19
23
1.97
60748--61706
481
2.0
482
96
0
1785
34
22
19
23
1.97
61228--62369
455
2.5
454
94
1
2010
34
22
19
23
1.96
63216--63270
22
2.5
22
93
0
101
40
14
10
34
1.81
63638--63793
54
2.9
54
88
0
231
21
24
16
37
1.94

Tables:   1

The End!