Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006492.1 Hibiscus syriacus cultivar Beakdansim tig00015788_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  75062

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14844--14890
19
2.5
19
100
0
94
40
14
10
34
1.81
20967--21016
20
2.5
21
79
20
63
44
26
16
14
1.85
28742--28791
19
2.5
20
84
12
68
48
24
14
14
1.80
33945--34050
29
3.7
29
97
0
194
14
33
27
24
1.94
34110--34150
14
2.9
14
85
0
64
9
31
39
19
1.84
42430--42518
3
29.0
3
81
18
96
66
0
2
31
1.04
42439--42514
22
3.3
22
85
5
98
67
0
2
30
1.05
42430--42518
28
3.3
28
89
9
141
66
0
2
31
1.04
42430--42518
19
4.4
20
82
17
114
66
0
2
31
1.04
44353--44377
13
1.9
13
100
0
50
16
44
8
32
1.76
44999--45036
20
1.9
20
88
0
58
26
26
5
42
1.76
46198--46252
17
3.1
17
73
21
51
43
1
1
52
1.22
46637--46682
2
23.0
2
100
0
92
50
0
0
50
1.00
46987--47380
187
2.1
188
93
2
672
43
3
8
44
1.52
48291--48412
39
3.1
39
86
0
154
38
18
17
26
1.92
48630--48662
2
16.5
2
100
0
66
0
51
0
48
1.00
48999--49152
48
3.2
48
90
0
245
24
9
35
30
1.87
52043--52097
28
2.0
28
85
0
74
32
9
16
41
1.80
57739--57788
21
2.4
21
83
6
57
60
4
6
30
1.39
61050--61162
60
1.9
60
83
3
147
33
17
12
36
1.87
68866--68925
31
2.0
30
83
3
75
50
10
15
25
1.74
71860--71889
2
15.0
2
100
0
60
50
0
0
50
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
72176--72299
60
2.1
59
84
4
160
29
17
20
32
1.96
74175--74222
15
3.2
14
76
23
53
45
2
16
35
1.59

Tables:   1

The End!