Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006496.1 Hibiscus syriacus cultivar Beakdansim tig00015797_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65085

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101--161
19
3.0
19
78
21
70
26
24
19
29
1.99
4939--4979
16
2.6
16
84
0
55
80
2
4
12
0.97
5397--5567
38
4.7
36
79
13
163
39
7
4
49
1.50
5393--5567
74
2.4
73
87
5
248
38
8
4
49
1.51
5998--6426
217
2.0
219
91
0
691
20
38
14
25
1.91
8210--8387
64
2.8
63
78
8
189
30
21
16
30
1.95
8356--8406
19
2.7
19
93
0
84
23
29
23
23
1.99
13230--13268
19
2.1
19
95
0
69
20
38
15
25
1.92
13216--13374
65
2.5
65
83
5
200
31
27
15
26
1.95
20292--20371
31
2.6
31
89
0
115
32
1
35
31
1.66
20749--20800
19
2.8
19
80
8
63
26
34
13
25
1.93
20748--20910
65
2.5
65
81
3
195
31
26
15
26
1.96
24479--24522
21
2.1
21
82
0
52
9
43
15
31
1.79
39005--39181
3
59.7
3
93
2
241
61
0
5
33
1.18
39352--40019
134
5.0
134
86
2
867
27
16
25
29
1.97
41626--41693
20
3.3
20
73
18
59
14
22
0
63
1.31
41648--41713
21
3.2
21
68
20
57
13
16
0
69
1.19
41628--41713
41
2.1
41
91
0
136
13
18
0
67
1.23
41685--41731
20
2.4
19
85
3
58
4
17
0
78
0.90
41685--41734
9
5.2
9
79
11
55
4
16
0
80
0.87
41685--41738
19
2.8
20
83
8
67
5
16
0
77
0.94
41704--41737
10
3.5
10
88
4
52
0
14
0
85
0.60
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
52518--52626
31
3.5
31
88
2
166
21
19
19
40
1.92
52517--52641
62
2.0
62
92
3
207
22
18
20
38
1.93
52519--52641
31
4.0
31
82
8
144
22
18
20
38
1.94
53335--53375
20
2.0
21
90
4
66
24
21
26
26
2.00
57357--57469
31
3.7
30
89
8
165
22
19
19
38
1.93
57358--57480
62
2.0
62
90
6
196
22
19
18
39
1.93
58164--58203
21
1.9
21
94
0
71
25
22
27
25
2.00
64150--64238
3
31.3
3
78
10
62
56
0
8
34
1.31
64159--64241
17
4.9
17
75
10
71
53
0
10
36
1.36

Tables:   1

The End!