Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006500.1 Hibiscus syriacus cultivar Beakdansim tig00015816_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60687

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2883--3487
54
11.2
54
80
2
601
31
20
24
22
1.98
3653--3687
3
11.7
3
88
11
54
34
0
0
65
0.93
8755--8806
26
2.0
26
100
0
104
23
26
23
26
2.00
12520--12592
31
2.4
31
90
4
112
19
12
26
42
1.86
12535--12601
31
2.2
31
86
2
91
20
17
25
35
1.95
15261--15318
18
3.4
18
76
13
68
22
0
50
27
1.50
15261--15314
21
2.8
19
86
8
65
24
0
50
25
1.50
15267--15454
33
5.9
33
86
7
262
28
0
42
28
1.56
15271--15454
60
3.0
60
89
6
262
28
0
42
28
1.56
16401--16477
35
2.2
36
97
2
147
46
19
9
24
1.79
16419--16475
18
3.2
18
67
2
53
47
19
8
24
1.77
16757--16893
15
9.1
15
84
0
166
45
13
15
26
1.82
21758--21860
54
1.9
53
82
9
129
38
7
1
51
1.42
23901--23928
11
2.5
11
100
0
56
17
25
0
57
1.41
30185--30271
29
3.0
29
100
0
174
34
24
10
31
1.89
43420--43493
28
2.6
29
81
12
82
40
8
14
36
1.76
45913--45947
18
2.0
18
88
5
54
42
22
17
17
1.88
47529--48077
4
141.0
4
93
6
959
48
25
0
25
1.54
53914--55581
105
16.0
105
94
1
2826
32
25
18
23
1.97
55896--55997
31
3.2
32
80
6
118
38
20
8
32
1.84
59435--59478
23
1.9
23
82
17
56
38
11
2
47
1.52

Tables:   1

The End!