Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006507.1 Hibiscus syriacus cultivar Beakdansim tig00015838_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80318

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9478--9526
21
2.3
21
85
0
62
34
26
16
22
1.95
16336--16429
21
4.4
21
72
19
86
31
27
15
24
1.96
18950--19116
91
1.8
91
90
0
271
37
17
17
27
1.92
28827--28867
11
3.4
12
90
10
66
9
0
7
82
0.83
30892--30964
31
2.4
31
86
4
94
34
4
16
45
1.66
31516--31560
19
2.4
19
96
0
81
28
24
20
26
1.99
36144--36226
37
2.2
37
93
0
139
31
24
16
27
1.97
39415--39567
76
2.0
76
82
8
188
30
3
11
54
1.55
39544--39606
19
3.2
19
75
4
54
31
0
12
55
1.37
40204--40247
18
2.4
19
92
3
72
18
6
0
75
1.02
45784--45879
5
18.8
5
82
8
68
19
10
1
68
1.24
45778--45851
10
7.4
10
86
6
78
18
12
1
67
1.29
51489--52559
4
268.8
4
98
0
2051
49
25
0
24
1.55
52557--52771
2
107.5
2
96
0
394
50
47
0
1
1.11
52791--53828
8
130.1
8
97
0
1562
21
0
28
50
1.50
53040--53828
4
198.2
4
96
1
1469
25
0
24
50
1.51
53829--53899
4
17.8
4
100
0
142
50
23
0
25
1.49
55518--55611
8
11.2
8
80
6
80
79
0
19
1
0.79
55524--55605
41
2.0
41
88
4
121
81
0
17
1
0.75
55518--55611
26
3.7
26
83
12
106
79
0
19
1
0.79
55524--55616
16
5.5
17
75
8
91
80
0
18
1
0.77
57724--58025
109
2.8
108
86
5
403
29
10
18
40
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
58106--58197
42
2.2
42
82
3
105
27
21
18
32
1.97
58356--58468
42
2.7
41
75
6
93
29
19
20
30
1.97
58047--58783
277
2.6
276
88
4
1046
29
16
20
33
1.95
64101--64157
26
2.2
25
80
14
71
42
7
5
45
1.53
64099--64163
27
2.4
28
87
7
98
41
6
4
47
1.49
64775--64904
41
3.2
40
79
7
127
36
19
15
29
1.92
67380--67474
47
2.0
46
90
6
147
32
11
24
31
1.91
68359--68602
42
5.8
42
80
3
231
25
21
19
33
1.97
70071--70103
16
2.0
17
88
5
50
33
12
9
45
1.73

Tables:   1

The End!