Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006509.1 Hibiscus syriacus cultivar Beakdansim tig00015853_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  47754

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2397--5710
110
30.3
109
86
5
4176
41
18
14
26
1.88
2397--5711
219
15.2
218
86
4
4363
41
18
14
26
1.88
2397--5719
549
6.1
541
89
3
4479
41
18
14
26
1.88
7215--7265
24
2.1
24
96
0
93
19
47
0
33
1.50
24091--24183
21
4.5
21
78
4
100
39
18
24
17
1.91
24091--24183
41
2.3
41
100
0
186
39
18
24
17
1.91
24110--24243
41
3.3
41
82
7
132
38
20
21
19
1.94
24172--24261
20
4.5
20
80
0
81
32
25
17
24
1.97
24169--24245
40
1.9
40
86
0
109
38
22
16
22
1.93
24453--24496
22
2.0
22
90
0
70
20
43
15
20
1.88
24760--24797
20
1.9
20
88
0
58
13
15
21
50
1.78
28771--28796
12
2.2
12
100
0
52
7
42
7
42
1.62
30474--30507
16
2.1
16
94
0
59
32
26
8
32
1.87
32530--32570
12
3.5
11
90
6
55
48
9
17
24
1.76
35228--35260
16
2.2
15
89
10
50
36
0
0
63
0.95
35424--35456
14
2.4
14
90
10
50
33
0
0
66
0.92
45757--45833
36
2.2
35
86
9
104
22
29
24
23
1.99
45757--45833
17
4.4
17
81
12
102
22
29
24
23
1.99

Tables:   1

The End!