Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006523.1 Hibiscus syriacus cultivar Beakdansim tig00015898_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55586

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9657--9730
29
2.5
31
76
8
82
32
17
8
41
1.79
11306--11477
46
3.8
45
91
2
265
31
23
7
37
1.83
15554--15600
20
2.4
19
82
10
51
4
19
0
76
0.95
18257--18382
46
2.8
45
89
3
182
30
21
8
39
1.83
22766--22820
12
4.4
13
82
11
62
70
0
1
27
0.97
22768--22821
25
2.1
26
83
10
67
72
0
1
25
0.95
23018--23072
2
27.5
2
100
0
110
50
0
0
49
1.00
23104--23150
23
2.0
23
84
15
62
70
0
2
27
0.99
23568--23669
37
2.8
37
86
0
132
32
13
13
40
1.84
24422--26440
106
19.0
106
91
0
3124
23
18
24
33
1.96
27405--27457
22
2.4
22
96
0
97
26
9
28
35
1.87
28074--28125
16
3.5
15
80
19
65
0
11
7
80
0.89
28075--28129
18
3.0
18
76
10
58
0
10
9
80
0.92
32177--32287
42
2.6
42
85
0
159
48
10
14
26
1.76
34766--34848
37
2.2
37
80
8
96
44
9
13
32
1.76
35033--35333
116
2.6
116
83
3
354
24
21
16
37
1.93
36191--36236
20
2.3
20
88
0
65
19
17
19
43
1.88
38407--38447
17
2.4
17
83
0
55
29
2
31
36
1.71
40826--40875
6
8.2
6
86
4
64
30
48
16
6
1.70
46737--46815
5
15.8
5
85
5
70
21
35
36
6
1.79
48405--48435
6
5.2
6
100
0
62
35
48
16
0
1.46
48433--48471
5
7.8
5
91
0
51
23
33
41
2
1.68

Tables:   1

The End!