Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006524.1 Hibiscus syriacus cultivar Beakdansim tig00015899_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61893

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4938--4998
25
2.4
25
78
13
70
11
16
13
59
1.62
16462--16600
45
3.1
45
87
4
201
41
20
12
25
1.87
19194--19235
14
2.6
17
75
21
54
40
0
7
52
1.29
19192--19303
56
1.9
58
82
15
142
43
1
7
47
1.41
19253--19347
35
2.6
37
85
6
131
44
1
7
47
1.38
19313--19366
26
2.0
27
85
7
74
40
0
5
53
1.24
19253--19350
37
2.8
35
87
6
128
43
1
7
47
1.37
32794--32966
39
4.3
39
74
17
156
43
2
7
46
1.44
32794--32912
37
3.1
38
84
3
159
44
1
7
46
1.42
32861--32960
49
2.1
48
90
5
157
45
3
7
45
1.46
36085--36412
59
5.6
59
88
4
470
37
18
10
33
1.86
36843--36879
20
1.9
19
94
5
58
24
24
16
35
1.95
44234--44521
59
4.9
59
86
4
397
37
18
11
32
1.87
44234--44507
114
2.4
116
89
2
399
37
17
11
32
1.86
45279--45320
17
2.5
17
92
0
66
30
14
9
45
1.77
45327--45385
17
3.5
17
68
13
50
30
13
8
47
1.73
45376--45421
18
2.6
18
92
0
74
32
6
13
47
1.68
60382--60539
40
4.0
40
78
4
160
29
26
18
25
1.98

Tables:   1

The End!