Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006527.1 Hibiscus syriacus cultivar Beakdansim tig00015907_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65567

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10478--10526
24
2.0
24
81
14
57
20
2
4
73
1.10
15110--15148
19
2.1
19
95
0
69
10
23
15
51
1.73
20129--20197
31
2.2
32
82
7
88
43
7
15
33
1.75
20767--20809
18
2.4
18
88
7
61
18
27
23
30
1.98
22077--22150
29
2.5
30
80
12
82
50
16
8
25
1.72
22085--22158
29
2.5
28
77
12
69
51
14
6
27
1.68
30494--30547
21
2.6
21
78
0
63
20
24
27
27
1.99
32384--32469
28
3.1
28
100
0
172
20
17
27
33
1.95
36709--36755
19
2.5
19
96
0
85
46
10
21
21
1.81
39988--40012
13
1.9
13
100
0
50
16
12
0
72
1.13
42237--42322
25
3.4
25
91
1
136
51
13
5
29
1.65
42286--42403
41
2.9
41
96
1
211
47
13
10
28
1.75
42237--42403
66
2.5
64
73
5
172
48
13
8
28
1.73
45186--45218
2
16.5
2
100
0
66
51
0
0
48
1.00
58472--59029
54
10.6
54
85
6
745
30
15
18
35
1.93
58472--59029
107
5.3
105
85
6
740
30
15
18
35
1.93
62057--62109
17
3.1
17
100
0
106
30
0
22
47
1.52
65182--65232
22
2.3
23
80
10
61
58
3
13
23
1.52

Tables:   1

The End!