Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000653.1 Hibiscus syriacus cultivar Beakdansim tig00001262_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  127697

Tables:   1   

This is table  1  of  1  ( 34 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8672--8758
42
2.1
42
88
0
129
22
18
22
35
1.95
9309--9419
21
5.3
21
70
14
77
4
32
19
43
1.71
9385--9453
21
3.4
21
84
8
97
2
40
21
34
1.68
9385--9441
19
2.9
19
89
5
87
3
38
24
33
1.73
15199--15275
27
3.0
25
71
15
68
33
22
3
40
1.72
15199--15275
24
3.0
26
81
9
95
33
22
3
40
1.72
17374--17415
12
3.5
12
96
0
75
30
11
9
47
1.72
21301--21385
42
2.0
42
100
0
170
42
7
14
36
1.72
23441--23482
12
3.5
12
96
0
75
30
11
9
47
1.72
26898--26946
22
2.2
22
88
0
71
36
10
12
40
1.77
27356--27412
25
2.3
25
96
0
105
40
15
17
26
1.90
31370--31412
21
2.0
21
81
0
50
23
18
20
37
1.94
33059--33128
3
23.0
3
85
11
90
32
1
1
64
1.11
33057--33128
20
3.7
20
83
7
87
33
1
1
63
1.11
33081--33128
10
5.0
10
94
5
82
37
0
0
62
0.95
38867--38934
30
2.3
30
84
0
82
42
19
5
32
1.75
47030--47468
133
3.3
133
86
3
575
26
30
18
24
1.98
47255--47329
39
1.9
38
83
2
96
20
37
20
22
1.94
47391--47507
43
2.8
40
74
7
119
23
32
18
24
1.97
47664--47743
3
27.0
3
92
5
128
31
1
1
66
1.08
52222--52251
16
1.9
16
93
6
53
63
0
3
33
1.11
53822--53922
51
2.0
48
94
5
175
39
9
1
48
1.48
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62731--62776
24
2.0
24
91
4
76
28
47
10
13
1.76
62731--62776
12
3.9
12
85
2
58
28
47
10
13
1.76
74270--74302
14
2.3
15
94
5
59
54
0
0
45
0.99
74580--74631
27
1.9
27
84
0
68
48
21
5
25
1.72
80922--80958
14
2.8
13
88
8
56
40
29
10
18
1.85
86183--86222
15
2.6
15
81
18
55
32
5
20
42
1.73
86759--86824
22
3.0
22
95
0
114
19
25
27
27
1.99
89920--89964
21
2.1
21
87
0
63
31
28
24
15
1.96
91610--91675
22
3.0
22
95
0
114
19
25
27
27
1.99
96712--96749
20
1.9
20
84
10
51
10
42
13
34
1.78
116782--116839
30
1.9
30
85
0
80
44
20
13
20
1.85
118487--118530
21
2.1
21
100
0
88
18
18
22
40
1.91

Tables:   1

The End!