Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006531.1 Hibiscus syriacus cultivar Beakdansim tig00015920_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  74261

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--209
6
5.2
6
96
0
53
16
38
29
16
1.90
6166--6194
2
14.5
2
100
0
58
48
0
0
51
1.00
10219--10331
60
1.9
60
87
3
165
33
20
14
31
1.92
10542--10679
60
2.3
60
79
2
152
39
15
14
31
1.87
12044--12090
23
2.0
23
95
0
85
55
21
0
23
1.44
12220--12253
16
2.1
16
94
0
59
52
0
0
47
1.00
17264--17298
17
2.0
18
88
5
54
42
5
2
48
1.41
19994--20029
2
18.0
2
100
0
72
50
0
0
50
1.00
24838--24870
16
2.0
17
88
5
50
33
30
6
30
1.82
29891--29965
37
2.0
37
97
0
141
48
18
9
24
1.77
32585--32622
12
3.1
12
79
20
51
31
2
0
65
1.06
41935--42000
30
2.2
29
81
8
69
36
7
24
31
1.83
42396--42476
23
3.5
22
81
9
90
58
20
12
8
1.61
42377--42476
47
2.1
47
87
3
139
57
21
13
9
1.63
42377--42456
24
3.4
24
81
13
103
55
21
15
8
1.67
42666--42716
14
3.6
14
86
0
75
64
11
7
15
1.48
49782--49853
36
2.0
36
83
8
92
50
1
2
45
1.25
50669--50796
65
2.0
65
95
0
229
35
21
13
30
1.91
69922--69960
20
2.0
19
90
5
60
23
20
25
30
1.98

Tables:   1

The End!