Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006538.1 Hibiscus syriacus cultivar Beakdansim tig00015965_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65504

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11712--11812
3
33.0
3
83
4
112
28
4
1
64
1.25
14958--14992
9
3.8
9
92
3
52
37
20
11
31
1.88
23745--24386
324
2.0
318
90
3
1011
38
13
23
25
1.91
33933--34140
32
6.2
32
80
11
213
15
9
34
40
1.80
33944--34126
99
1.8
100
85
5
262
16
8
32
42
1.79
37383--37445
31
2.0
31
96
0
117
34
4
19
41
1.72
39225--39359
34
4.0
34
92
3
229
24
9
17
48
1.76
42199--42228
3
10.0
3
100
0
60
66
0
0
33
0.92
48067--48092
2
13.0
2
100
0
52
50
0
0
50
1.00
50181--50243
32
2.0
32
93
6
110
17
25
19
38
1.93
59801--59846
18
2.6
17
86
10
65
60
2
4
32
1.28
63920--63944
2
12.5
2
100
0
50
52
48
0
0
1.00

Tables:   1

The End!