Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006542.1 Hibiscus syriacus cultivar Beakdansim tig00015970_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60484

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1704--1780
5
15.8
5
81
9
52
22
33
37
6
1.80
3359--3389
6
5.2
6
100
0
62
35
48
16
0
1.46
3387--3425
5
7.8
5
91
0
51
23
33
41
2
1.68
11274--11315
22
2.0
22
85
4
59
16
21
21
40
1.91
13081--13129
24
2.0
24
96
0
89
55
4
22
18
1.60
25353--25392
21
1.9
21
84
0
53
62
5
17
15
1.49
30915--30953
21
1.9
20
84
5
51
35
20
15
28
1.93
35568--35596
14
2.0
15
93
6
51
27
27
3
41
1.72
40058--40088
13
2.4
13
100
0
62
32
29
0
38
1.57
45324--45370
23
2.0
25
83
8
62
44
0
25
29
1.54

Tables:   1

The End!