Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006546.1 Hibiscus syriacus cultivar Beakdansim tig00015977_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65979

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15980--16013
11
3.2
11
91
8
52
79
0
20
0
0.73
15980--16009
5
5.8
5
92
7
51
80
0
20
0
0.72
22062--22101
17
2.4
17
86
0
53
32
15
12
40
1.84
22161--22204
18
2.4
18
88
0
70
38
6
6
47
1.57
26633--26680
2
24.0
2
100
0
96
50
0
0
50
1.00
29044--29082
19
2.1
19
90
4
62
58
15
15
10
1.62
32802--32840
19
2.1
19
90
4
62
58
15
15
10
1.62
49951--50002
16
3.5
14
78
17
52
1
19
0
78
0.84
49951--49999
21
2.4
21
80
13
57
2
20
0
77
0.87
49948--50001
18
3.1
17
86
10
74
1
20
0
77
0.86
53311--53359
24
2.0
24
96
0
89
16
14
36
32
1.89
61201--61250
14
3.8
13
77
17
59
80
2
18
0
0.82
61200--61246
17
2.6
18
83
6
60
80
2
17
0
0.80
61201--61250
8
6.4
8
80
13
59
80
2
18
0
0.82
61201--61249
25
2.0
25
88
8
73
79
2
18
0
0.83

Tables:   1

The End!