Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006547.1 Hibiscus syriacus cultivar Beakdansim tig00015979_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61406

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2726--2772
21
2.3
20
89
7
69
0
8
8
82
0.83
5638--5676
19
2.0
20
85
5
53
2
17
7
71
1.21
6484--6666
91
2.0
91
88
2
269
30
21
27
20
1.98
7770--7808
11
3.7
10
89
6
51
33
12
30
23
1.92
8688--8728
22
1.9
21
85
14
57
34
34
4
26
1.78
11549--11583
18
1.9
18
88
11
54
31
28
11
28
1.92
13220--13260
22
1.9
21
90
5
64
36
34
2
26
1.70
13848--13948
17
5.9
17
75
2
76
39
9
16
33
1.82
41885--41974
47
1.9
47
84
10
123
37
23
26
12
1.90
42809--42843
12
3.2
11
88
11
54
77
0
22
0
0.78
42790--42843
18
3.1
17
84
12
65
77
1
20
0
0.86
48759--48798
17
2.4
17
86
0
53
32
15
12
40
1.84
48858--48901
18
2.4
18
88
0
70
38
6
6
47
1.57

Tables:   1

The End!