Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006549.1 Hibiscus syriacus cultivar Beakdansim tig00016003_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70890

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2190--2219
13
2.4
13
94
5
53
26
30
0
43
1.55
13872--13914
23
1.9
21
81
13
50
32
18
13
34
1.90
19509--19538
13
2.4
13
94
5
53
43
0
30
26
1.55
22148--22204
28
2.1
26
83
6
69
59
15
15
8
1.59
28630--28684
23
2.3
25
87
6
87
60
10
20
9
1.57
28678--28711
14
2.4
14
90
9
52
82
0
17
0
0.67
28678--28711
5
7.2
5
87
12
54
82
0
17
0
0.67
46234--46302
33
2.1
33
83
5
86
31
1
36
30
1.67
52247--52429
91
2.0
91
91
0
294
30
23
26
19
1.98
54144--54186
23
1.9
21
81
13
50
34
13
18
32
1.90
58160--58280
23
5.1
23
71
24
83
31
35
3
29
1.74
58158--58297
36
3.9
36
95
0
246
30
35
3
30
1.75
58182--58278
13
8.0
12
71
25
62
30
35
3
30
1.73
62378--62485
11
9.2
11
71
22
78
31
36
3
28
1.75
62376--62483
36
3.0
36
98
0
207
30
36
3
29
1.75
62378--62502
23
5.4
22
76
18
103
31
36
4
28
1.76

Tables:   1

The End!