Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006553.1 Hibiscus syriacus cultivar Beakdansim tig00016016_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51149

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--640
13
3.5
15
79
15
54
30
1
0
67
1.02
3186--3218
2
16.5
2
100
0
66
48
0
0
51
1.00
9371--9411
21
1.9
22
85
5
57
26
4
65
2
1.25
10783--10837
25
2.3
22
79
14
56
36
9
0
54
1.32
11335--11390
13
4.4
13
73
13
53
21
23
1
53
1.55
11437--11489
19
2.7
19
76
2
52
35
20
1
41
1.64
14904--15171
20
13.2
20
78
15
207
41
23
19
16
1.90
14985--15164
40
4.4
41
87
7
235
36
26
20
17
1.94
14985--15164
60
2.9
60
89
6
256
36
26
20
17
1.94
15267--15497
6
38.5
6
100
0
462
33
50
16
0
1.46
15992--16120
6
21.5
6
100
0
258
0
16
50
33
1.45
16216--16603
20
19.2
20
76
13
352
15
19
23
41
1.90
19764--20077
70
4.5
70
86
0
448
35
12
17
34
1.87
19761--20073
140
2.2
140
96
0
572
36
12
17
34
1.87
25689--25730
12
3.5
11
84
15
57
0
19
4
76
0.96
25929--25974
15
2.9
16
84
12
60
60
0
30
8
1.26
32789--32822
15
2.1
16
89
10
52
11
32
26
29
1.92
35529--35764
89
2.7
88
94
2
395
22
22
26
27
1.99
40572--40650
40
2.0
40
89
0
122
26
16
21
35
1.94
40711--40753
20
2.2
20
91
0
68
18
4
20
55
1.60
40750--40894
44
3.2
44
84
5
184
39
6
20
33
1.78
45487--45580
20
4.4
21
76
11
77
24
20
25
29
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49223--49261
20
2.0
20
84
0
51
23
17
12
46
1.83

Tables:   1

The End!