Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000656.1 Hibiscus syriacus cultivar Beakdansim tig00001270_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  80188

Tables:   1   

This is table  1  of  1  ( 32 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--233
33
2.0
33
85
5
89
25
45
0
28
1.54
262--322
20
3.1
20
92
2
97
16
32
11
39
1.84
2517--2563
20
2.4
19
79
10
58
17
14
12
55
1.70
2484--2955
181
2.6
181
88
1
687
26
16
14
43
1.86
4458--4483
2
13.0
2
100
0
52
50
0
0
50
1.00
9012--9062
21
2.6
20
76
11
52
37
7
3
50
1.50
9458--9487
16
1.9
16
93
6
53
26
0
0
73
0.84
10285--10335
24
2.2
23
82
3
57
25
11
23
39
1.89
11447--11478
13
2.5
13
94
0
55
28
6
12
53
1.62
21875--21905
3
10.3
3
92
0
53
0
32
3
64
1.09
29125--29198
34
2.2
35
81
16
93
58
14
4
22
1.54
29224--29297
13
5.8
13
74
15
73
71
10
0
17
1.13
31460--31493
9
3.9
9
84
7
52
61
2
0
35
1.11
31456--31494
17
2.4
17
95
4
71
61
5
0
33
1.18
31538--31575
20
1.9
20
94
0
67
44
0
28
26
1.54
31540--31579
10
4.0
10
83
0
53
40
0
30
30
1.57
33087--33155
30
2.3
30
80
5
86
26
5
14
53
1.63
33228--33405
57
3.1
57
80
10
200
33
6
6
54
1.50
47393--47459
27
2.5
27
85
4
82
38
11
4
44
1.62
47717--47793
31
2.7
29
88
8
113
49
7
10
32
1.66
60041--60099
23
2.6
22
84
5
73
27
30
20
22
1.98
60051--60101
23
2.2
23
96
0
93
23
35
17
23
1.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
63468--63534
2
34.0
2
96
3
127
49
0
0
50
1.00
65968--66044
30
2.6
30
87
0
118
32
20
32
14
1.93
65968--66064
30
3.2
28
77
11
86
32
21
30
14
1.93
70751--70802
24
2.2
23
80
12
61
48
0
7
44
1.31
72337--72379
22
2.0
22
86
4
61
41
27
11
18
1.85
74034--74226
30
6.4
30
98
0
368
33
23
19
23
1.97
74034--74251
90
2.4
90
93
0
355
33
24
18
22
1.97
74212--74304
31
3.0
31
79
3
98
34
21
17
26
1.95
77499--77631
30
4.4
30
96
0
248
33
24
18
24
1.97
77884--77928
4
11.2
4
95
0
81
46
24
0
28
1.53

Tables:   1

The End!