Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006562.1 Hibiscus syriacus cultivar Beakdansim tig00016053_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  66016

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2398--2539
31
4.7
30
74
10
101
45
5
4
44
1.46
3017--3092
40
1.9
40
91
0
125
19
10
19
50
1.77
3479--3521
20
2.2
20
91
0
68
32
11
20
34
1.89
23767--23793
13
2.1
13
100
0
54
37
14
25
22
1.93
25026--25090
2
32.5
2
100
0
130
50
0
0
49
1.00
29172--29205
18
1.9
18
88
5
52
23
26
23
26
2.00
39970--40093
31
3.9
32
77
8
128
29
18
20
31
1.97
44341--44366
13
2.0
13
100
0
52
84
0
15
0
0.62
58596--58643
23
2.1
23
88
0
69
35
6
18
39
1.76
59132--59190
31
1.9
31
92
0
100
37
18
6
37
1.78
59614--59686
23
3.2
23
88
0
110
38
20
5
35
1.76
60103--60175
23
3.2
23
92
0
119
38
21
5
34
1.77
58717--60361
488
3.4
488
94
1
2808
40
10
7
42
1.67
63052--63298
120
2.1
120
93
0
422
38
16
13
31
1.87
63356--63586
118
2.0
117
91
0
372
39
16
12
32
1.85
62888--63777
297
3.0
302
95
2
1585
35
16
14
33
1.89
63469--63872
182
2.2
183
95
1
722
34
16
14
34
1.89
65078--65111
12
2.8
12
86
0
50
17
32
8
41
1.80
65075--65111
18
2.1
18
89
0
56
16
32
10
40
1.83

Tables:   1

The End!