Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006569.1 Hibiscus syriacus cultivar Beakdansim tig00016071_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45847

Tables:   1   

This is table  1  of  1  ( 26 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5350--5387
2
19.0
2
100
0
76
50
0
0
50
1.00
6515--6593
21
3.8
21
76
15
74
22
20
34
22
1.97
6672--6729
30
2.0
29
90
10
91
44
17
5
32
1.70
6672--6731
29
2.0
30
93
6
104
43
16
6
33
1.74
10270--10404
38
3.6
39
80
9
138
30
20
8
40
1.82
10415--10487
37
1.9
38
88
2
112
31
15
8
45
1.75
10312--10586
102
2.7
101
85
5
358
32
17
9
40
1.82
10632--10793
63
2.5
65
82
6
188
27
20
11
40
1.87
10743--10959
36
5.9
36
82
2
182
24
21
14
39
1.91
10743--10966
72
3.1
73
80
6
247
24
21
13
40
1.90
10867--11024
39
4.1
39
87
2
178
29
18
13
37
1.90
11026--11217
52
3.7
52
85
2
242
30
11
19
38
1.87
11026--11262
105
2.2
108
81
7
268
31
10
18
38
1.86
11311--11412
42
2.4
42
82
6
125
23
20
23
32
1.98
11565--11627
19
3.0
22
65
13
60
25
17
26
30
1.97
11546--11688
41
3.5
41
79
7
164
25
20
22
31
1.98
11542--11613
19
3.6
20
75
10
67
26
23
23
26
2.00
12598--12939
136
2.6
134
85
4
433
34
16
23
26
1.95
13601--13667
5
12.6
5
98
1
98
0
19
55
25
1.43
13748--13860
41
2.8
40
89
5
165
38
22
21
17
1.93
13832--13883
20
2.6
20
96
0
95
42
21
25
11
1.86
14114--14139
13
2.0
13
100
0
52
30
23
0
46
1.53
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18395--19310
388
2.4
388
93
0
1526
27
19
18
35
1.95
29709--29753
22
2.0
22
95
0
81
46
11
4
37
1.60
41758--41782
5
5.0
5
100
0
50
20
20
0
60
1.37
44819--44882
20
3.3
20
72
12
53
68
7
12
10
1.38

Tables:   1

The End!