Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006572.1 Hibiscus syriacus cultivar Beakdansim tig00016100_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59760

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
315--418
37
2.8
37
88
1
147
29
13
14
42
1.84
10237--10330
30
3.1
30
81
6
111
38
9
19
32
1.84
10278--10329
15
3.5
15
72
0
50
44
9
13
32
1.76
16335--16507
90
1.9
89
95
1
310
38
10
6
43
1.66
22697--22743
8
6.5
8
77
22
59
14
38
25
21
1.92
22692--22736
13
3.3
13
90
6
63
15
42
24
17
1.88
22713--22744
7
4.4
7
92
7
55
12
34
28
25
1.92
22697--22743
15
3.3
15
91
5
71
14
38
25
21
1.92
27483--27543
13
4.3
13
77
18
68
16
44
21
18
1.87
27461--27537
18
4.6
18
75
15
83
18
48
19
14
1.82
27465--27543
31
2.5
31
87
0
122
17
45
20
16
1.85
30041--30140
24
4.2
24
74
5
94
22
14
17
47
1.82
31853--31908
22
2.6
21
71
23
53
50
1
3
44
1.29
42709--42784
36
2.1
36
85
7
100
47
1
3
47
1.29
42924--42967
20
2.3
19
85
11
63
20
25
9
45
1.80
42930--42967
20
1.9
20
94
0
67
21
23
10
44
1.83
44006--44039
9
3.7
9
96
4
59
55
0
0
44
0.99
46312--46343
2
16.0
2
100
0
64
50
0
0
50
1.00
47386--47766
191
2.0
191
98
0
744
26
13
17
42
1.86

Tables:   1

The End!