Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006583.1 Hibiscus syriacus cultivar Beakdansim tig00016135_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50007

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2588--2667
15
4.8
16
70
21
56
47
1
1
50
1.17
2745--2818
26
3.0
25
80
9
73
48
0
1
50
1.09
2745--2806
26
2.5
25
82
7
74
51
0
0
48
1.00
11499--11552
27
2.0
27
92
0
90
27
16
9
46
1.78
13777--13835
30
2.0
29
93
3
100
62
10
0
27
1.27
22728--22778
21
2.4
21
93
0
93
31
15
19
33
1.93
25791--25828
19
2.0
19
85
10
51
50
5
2
42
1.39
26034--26071
19
2.0
19
89
0
58
47
26
10
15
1.78
25987--26115
65
2.0
62
85
4
168
40
22
17
20
1.91
26940--26998
2
29.5
2
100
0
118
49
0
0
50
1.00
30804--30847
22
2.0
22
82
8
54
50
0
4
45
1.22
32744--32786
21
2.0
22
86
4
61
20
18
32
27
1.96
32754--32828
21
3.6
21
72
3
62
25
14
33
26
1.94
33841--33998
79
2.0
79
96
0
289
32
22
19
24
1.97
36280--36316
2
18.5
2
100
0
74
48
0
0
51
1.00
41557--41616
30
2.1
28
84
6
75
51
13
6
28
1.66
41665--41728
28
2.3
29
83
5
87
73
7
1
17
1.14
41669--41730
27
2.3
26
83
10
79
72
8
1
17
1.17
42474--42510
2
19.0
2
94
5
67
48
0
0
51
1.00
42790--42873
30
2.8
30
82
5
91
34
0
33
32
1.58
43496--43537
19
2.1
19
86
8
57
26
19
21
33
1.97
44607--44636
16
1.9
16
93
6
53
66
3
0
30
1.07
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
49407--49575
83
2.0
83
95
0
302
38
14
18
28
1.90

Tables:   1

The End!