Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006585.1 Hibiscus syriacus cultivar Beakdansim tig00016142_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61714

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2749--2823
29
2.6
29
89
0
114
30
16
12
41
1.84
4823--4929
29
3.7
29
96
1
189
30
0
5
63
1.17
4833--5026
57
3.3
58
82
3
194
33
1
8
56
1.38
6884--6924
7
5.9
7
100
0
82
73
0
26
0
0.84
9660--9686
4
6.8
4
100
0
54
77
0
22
0
0.76
18224--18265
18
2.3
19
83
4
50
23
0
26
50
1.50
18438--18572
31
4.3
32
83
7
170
27
17
20
35
1.94
18438--18591
31
4.9
31
80
6
168
28
16
20
34
1.94
18438--18572
63
2.2
62
86
1
180
27
17
20
35
1.94
18438--18591
63
2.5
62
82
5
177
28
16
20
34
1.94
26483--26588
51
2.1
51
92
0
176
28
35
9
26
1.87
28946--28995
25
2.0
25
100
0
100
36
8
12
44
1.71
35878--36067
60
3.2
60
79
7
197
38
6
23
30
1.81
37219--37292
34
2.1
35
90
2
114
29
0
24
45
1.53
49167--49209
21
2.0
21
90
0
68
39
4
20
34
1.74
52078--52237
65
2.5
63
82
6
187
31
23
18
26
1.97
52095--52257
64
2.5
63
80
12
154
29
24
19
26
1.99
57987--58041
22
2.6
21
77
13
51
23
23
20
32
1.98
59544--59587
21
2.1
21
82
0
52
9
43
15
31
1.79
60651--60804
64
2.5
59
82
10
175
31
24
18
25
1.97

Tables:   1

The End!