Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006593.1 Hibiscus syriacus cultivar Beakdansim tig00016173_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59219

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5750--5789
20
2.0
20
100
0
80
40
5
10
45
1.60
7904--7965
24
2.6
22
76
18
54
58
1
3
37
1.24
8744--8785
18
2.3
18
91
0
66
45
2
7
45
1.44
9023--9108
41
2.1
42
84
2
111
33
22
13
30
1.93
15311--15398
31
2.8
31
91
3
133
56
7
15
19
1.63
27136--27215
30
2.7
30
82
0
97
25
10
11
53
1.67
44028--44098
8
8.9
8
96
0
124
40
25
8
25
1.83
53483--53523
16
2.7
16
92
7
68
60
21
9
7
1.52
53591--53635
16
2.8
16
89
0
72
55
20
13
11
1.68
57029--57061
13
2.5
14
85
14
52
27
0
6
66
1.15
58188--58283
41
2.3
42
89
7
144
51
22
5
20
1.68
59037--59062
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!