Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: VEPZ01006604.1 Hibiscus syriacus cultivar Beakdansim tig00016202_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 110150
ACGTcount: A:0.35, C:0.15, G:0.17, T:0.34
Found at i:9239 original size:27 final size:27
Alignment explanation
Indices: 9204--9283 Score: 83
Period size: 27 Copynumber: 2.9 Consensus size: 27
9194 CATATAGTGT
* *
9204 ATATGTATTATATACATAATATATA-C
1 ATATATATTATATACATAATATATAGA
*
9230 ATACTATATTATATATTATAATTATATAGA
1 ATA-TATATTATATA-CATAA-TATATAGA
9260 ATATATATTAT-TACATACATATAT
1 ATATATATTATATACATA-ATATAT
9284 TAATTTGTTT
Statistics
Matches: 45, Mismatches: 4, Indels: 9
0.78 0.07 0.16
Matches are distributed among these distances:
26 3 0.07
27 18 0.40
28 7 0.16
29 14 0.31
30 3 0.07
ACGTcount: A:0.46, C:0.06, G:0.03, T:0.45
Consensus pattern (27 bp):
ATATATATTATATACATAATATATAGA
Found at i:9244 original size:16 final size:15
Alignment explanation
Indices: 9204--9281 Score: 53
Period size: 13 Copynumber: 5.5 Consensus size: 15
9194 CATATAGTGT
*
9204 ATATGTATTATATAC
1 ATATATATTATATAC
9219 --ATA-A-TATATAC
1 ATATATATTATATAC
9230 ATACTATATTATATA-
1 ATA-TATATTATATAC
* *
9245 TTATA-ATTATATAGA
1 ATATATATTATATA-C
9260 ATATATATTAT-TAC
1 ATATATATTATATAC
*
9274 ATACATAT
1 ATATATAT
9282 ATTAATTTGT
Statistics
Matches: 50, Mismatches: 5, Indels: 17
0.69 0.07 0.24
Matches are distributed among these distances:
11 7 0.14
12 1 0.02
13 11 0.22
14 11 0.22
15 9 0.18
16 11 0.22
ACGTcount: A:0.46, C:0.06, G:0.03, T:0.45
Consensus pattern (15 bp):
ATATATATTATATAC
Found at i:10405 original size:19 final size:18
Alignment explanation
Indices: 10381--10426 Score: 65
Period size: 19 Copynumber: 2.5 Consensus size: 18
10371 TTAATTCAGT
10381 CTTTTTTATATTTTATTC
1 CTTTTTTATATTTTATTC
* *
10399 CTATTTTAATCTTTTATTC
1 CT-TTTTTATATTTTATTC
10418 CTTTTTTAT
1 CTTTTTTAT
10427 TTATACAATT
Statistics
Matches: 24, Mismatches: 3, Indels: 2
0.83 0.10 0.07
Matches are distributed among these distances:
18 8 0.33
19 16 0.67
ACGTcount: A:0.17, C:0.13, G:0.00, T:0.70
Consensus pattern (18 bp):
CTTTTTTATATTTTATTC
Found at i:10554 original size:4 final size:5
Alignment explanation
Indices: 10534--10604 Score: 58
Period size: 5 Copynumber: 14.4 Consensus size: 5
10524 TTTTTCCTTC
* ** * *
10534 TTATT TT-TT TTATT TTATT TAATT CCATT ATT-TT TTCATT TCATT TCATT
1 TTATT TTATT TTATT TTATT TTATT TTATT -TTATT TT-ATT TTATT TTATT
10584 TTATT TTA-T TTATT TTATT TT
1 TTATT TTATT TTATT TTATT TT
10605 TTCCTTTTTA
Statistics
Matches: 54, Mismatches: 7, Indels: 10
0.76 0.10 0.14
Matches are distributed among these distances:
4 10 0.19
5 41 0.76
6 3 0.06
ACGTcount: A:0.20, C:0.07, G:0.00, T:0.73
Consensus pattern (5 bp):
TTATT
Found at i:21133 original size:11 final size:11
Alignment explanation
Indices: 21114--21177 Score: 62
Period size: 10 Copynumber: 5.9 Consensus size: 11
21104 AGGGCGCCCT
*
21114 AAATTGAAAAA
1 AAATAGAAAAA
21125 AAATAG-AAAA
1 AAATAGAAAAA
21135 AAA-AGAAAAA
1 AAATAGAAAAA
21145 GAAATAGAAAAA
1 -AAATAGAAAAA
* *
21157 TAAAAAGAAAAG
1 -AAATAGAAAAA
21169 AAA-AGAAAA
1 AAATAGAAAA
21178 TAAGGTGGGT
Statistics
Matches: 46, Mismatches: 4, Indels: 7
0.81 0.07 0.12
Matches are distributed among these distances:
9 2 0.04
10 17 0.37
11 11 0.24
12 16 0.35
ACGTcount: A:0.80, C:0.00, G:0.12, T:0.08
Consensus pattern (11 bp):
AAATAGAAAAA
Found at i:21137 original size:12 final size:11
Alignment explanation
Indices: 21120--21177 Score: 55
Period size: 11 Copynumber: 5.2 Consensus size: 11
21110 CCCTAAATTG
* *
21120 AAAAAAAATAG
1 AAAAAAAAGAA
21131 AAAAAAAAGAA
1 AAAAAAAAGAA
*
21142 AAAGAAATAGAA
1 AAA-AAAAAGAA
21154 AAATAAAAAG-A
1 AAA-AAAAAGAA
*
21165 AAAGAAAAGAA
1 AAAAAAAAGAA
21176 AA
1 AA
21178 TAAGGTGGGT
Statistics
Matches: 39, Mismatches: 6, Indels: 4
0.80 0.12 0.08
Matches are distributed among these distances:
10 5 0.13
11 19 0.49
12 15 0.38
ACGTcount: A:0.83, C:0.00, G:0.12, T:0.05
Consensus pattern (11 bp):
AAAAAAAAGAA
Found at i:21145 original size:6 final size:6
Alignment explanation
Indices: 21134--21177 Score: 56
Period size: 6 Copynumber: 7.7 Consensus size: 6
21124 AAAATAGAAA
* *
21134 AAAAAG AAAAAG AAATAG AAAAAT AAAAAG -AAAAG -AAAAG AAAA
1 AAAAAG AAAAAG AAAAAG AAAAAG AAAAAG AAAAAG AAAAAG AAAA
21178 TAAGGTGGGT
Statistics
Matches: 33, Mismatches: 4, Indels: 2
0.85 0.10 0.05
Matches are distributed among these distances:
5 10 0.30
6 23 0.70
ACGTcount: A:0.82, C:0.00, G:0.14, T:0.05
Consensus pattern (6 bp):
AAAAAG
Found at i:21798 original size:21 final size:21
Alignment explanation
Indices: 21772--21812 Score: 55
Period size: 21 Copynumber: 2.0 Consensus size: 21
21762 CATATTGAAG
21772 AATTCAAAATCAAGAATCAAA
1 AATTCAAAATCAAGAATCAAA
* * *
21793 AATTCAGATTCCAGAATCAA
1 AATTCAAAATCAAGAATCAA
21813 GAGTCATCGA
Statistics
Matches: 17, Mismatches: 3, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
21 17 1.00
ACGTcount: A:0.54, C:0.17, G:0.07, T:0.22
Consensus pattern (21 bp):
AATTCAAAATCAAGAATCAAA
Found at i:32752 original size:18 final size:18
Alignment explanation
Indices: 32729--32767 Score: 69
Period size: 18 Copynumber: 2.2 Consensus size: 18
32719 CGACCCGTTT
32729 ACCCGACCAGTTGACCCG
1 ACCCGACCAGTTGACCCG
*
32747 ACCCGACCCGTTGACCCG
1 ACCCGACCAGTTGACCCG
32765 ACC
1 ACC
32768 GTTGACCCGT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.21, C:0.49, G:0.21, T:0.10
Consensus pattern (18 bp):
ACCCGACCAGTTGACCCG
Found at i:32752 original size:31 final size:30
Alignment explanation
Indices: 32716--32776 Score: 104
Period size: 31 Copynumber: 2.0 Consensus size: 30
32706 CGACCCGTTT
*
32716 ACCCGACCCGTTTACCCGACCAGTTGACCCG
1 ACCCGACCCGTTGACCCGACC-GTTGACCCG
32747 ACCCGACCCGTTGACCCGACCGTTGACCCG
1 ACCCGACCCGTTGACCCGACCGTTGACCCG
32777 TTGACTGTTG
Statistics
Matches: 29, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
30 9 0.31
31 20 0.69
ACGTcount: A:0.18, C:0.46, G:0.21, T:0.15
Consensus pattern (30 bp):
ACCCGACCCGTTGACCCGACCGTTGACCCG
Found at i:32762 original size:8 final size:8
Alignment explanation
Indices: 32751--32804 Score: 57
Period size: 8 Copynumber: 7.5 Consensus size: 8
32741 GACCCGACCC
32751 GACCCGTT
1 GACCCGTT
32759 GACCC---
1 GACCCGTT
32764 GA-CCGTT
1 GACCCGTT
32771 GACCCGTT
1 GACCCGTT
*
32779 GA-CTGTT
1 GACCCGTT
32786 GACCCGTT
1 GACCCGTT
32794 GA-CCGTT
1 GACCCGTT
32801 GACC
1 GACC
32805 GGAGTTGACC
Statistics
Matches: 38, Mismatches: 2, Indels: 12
0.73 0.04 0.23
Matches are distributed among these distances:
4 2 0.05
5 2 0.05
7 15 0.39
8 19 0.50
ACGTcount: A:0.15, C:0.35, G:0.26, T:0.24
Consensus pattern (8 bp):
GACCCGTT
Found at i:32767 original size:13 final size:13
Alignment explanation
Indices: 32703--32751 Score: 80
Period size: 13 Copynumber: 3.8 Consensus size: 13
32693 ACCGGTCATA
32703 ACCCGACCCGTTT
1 ACCCGACCCGTTT
32716 ACCCGACCCGTTT
1 ACCCGACCCGTTT
* *
32729 ACCCGACCAGTTG
1 ACCCGACCCGTTT
32742 ACCCGACCCG
1 ACCCGACCCG
32752 ACCCGTTGAC
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 33 1.00
ACGTcount: A:0.18, C:0.47, G:0.18, T:0.16
Consensus pattern (13 bp):
ACCCGACCCGTTT
Found at i:32786 original size:7 final size:7
Alignment explanation
Indices: 32764--32805 Score: 57
Period size: 7 Copynumber: 5.7 Consensus size: 7
32754 CCGTTGACCC
32764 GACCGTT
1 GACCGTT
32771 GACCCGTT
1 GA-CCGTT
*
32779 GACTGTT
1 GACCGTT
32786 GACCCGTT
1 GA-CCGTT
32794 GACCGTT
1 GACCGTT
32801 GACCG
1 GACCG
32806 GAGTTGACCA
Statistics
Matches: 31, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
7 18 0.58
8 13 0.42
ACGTcount: A:0.14, C:0.31, G:0.29, T:0.26
Consensus pattern (7 bp):
GACCGTT
Found at i:32788 original size:15 final size:15
Alignment explanation
Indices: 32764--32804 Score: 73
Period size: 15 Copynumber: 2.7 Consensus size: 15
32754 CCGTTGACCC
32764 GACCGTTGACCCGTT
1 GACCGTTGACCCGTT
*
32779 GACTGTTGACCCGTT
1 GACCGTTGACCCGTT
32794 GACCGTTGACC
1 GACCGTTGACC
32805 GGAGTTGACC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
15 24 1.00
ACGTcount: A:0.15, C:0.32, G:0.27, T:0.27
Consensus pattern (15 bp):
GACCGTTGACCCGTT
Found at i:35348 original size:12 final size:12
Alignment explanation
Indices: 35333--35397 Score: 69
Period size: 12 Copynumber: 5.4 Consensus size: 12
35323 ATGACATGAA
*
35333 TTCTATTCTGAT
1 TTCTGTTCTGAT
*
35345 TTCTGATCTGGA-
1 TTCTGTTCT-GAT
35357 TTCTGTTCTGAT
1 TTCTGTTCTGAT
* *
35369 ATCTGTTCTGAA
1 TTCTGTTCTGAT
*
35381 TTCTGTTTTGAT
1 TTCTGTTCTGAT
35393 TTCTG
1 TTCTG
35398 ATATCTTCGT
Statistics
Matches: 43, Mismatches: 8, Indels: 4
0.78 0.15 0.07
Matches are distributed among these distances:
11 2 0.05
12 39 0.91
13 2 0.05
ACGTcount: A:0.14, C:0.15, G:0.17, T:0.54
Consensus pattern (12 bp):
TTCTGTTCTGAT
Found at i:35359 original size:24 final size:24
Alignment explanation
Indices: 35329--35399 Score: 97
Period size: 24 Copynumber: 3.0 Consensus size: 24
35319 ATAAATGACA
*
35329 TGAATTCTATTCTGATTTCTGATC
1 TGAATTCTGTTCTGATTTCTGATC
* * *
35353 TGGATTCTGTTCTGATATCTGTTC
1 TGAATTCTGTTCTGATTTCTGATC
*
35377 TGAATTCTGTTTTGATTTCTGAT
1 TGAATTCTGTTCTGATTTCTGAT
35400 ATCTTCGTTT
Statistics
Matches: 39, Mismatches: 8, Indels: 0
0.83 0.17 0.00
Matches are distributed among these distances:
24 39 1.00
ACGTcount: A:0.17, C:0.14, G:0.17, T:0.52
Consensus pattern (24 bp):
TGAATTCTGTTCTGATTTCTGATC
Found at i:37565 original size:18 final size:18
Alignment explanation
Indices: 37542--37580 Score: 69
Period size: 18 Copynumber: 2.2 Consensus size: 18
37532 CGACCCGTTT
37542 ACCCGACCAGTTGACCCG
1 ACCCGACCAGTTGACCCG
*
37560 ACCCGACCCGTTGACCCG
1 ACCCGACCAGTTGACCCG
37578 ACC
1 ACC
37581 GTTGACCCGT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.21, C:0.49, G:0.21, T:0.10
Consensus pattern (18 bp):
ACCCGACCAGTTGACCCG
Found at i:37565 original size:31 final size:30
Alignment explanation
Indices: 37529--37589 Score: 104
Period size: 31 Copynumber: 2.0 Consensus size: 30
37519 CGACCCGTTT
*
37529 ACCCGACCCGTTTACCCGACCAGTTGACCCG
1 ACCCGACCCGTTGACCCGACC-GTTGACCCG
37560 ACCCGACCCGTTGACCCGACCGTTGACCCG
1 ACCCGACCCGTTGACCCGACCGTTGACCCG
37590 TTGACTGTTG
Statistics
Matches: 29, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
30 9 0.31
31 20 0.69
ACGTcount: A:0.18, C:0.46, G:0.21, T:0.15
Consensus pattern (30 bp):
ACCCGACCCGTTGACCCGACCGTTGACCCG
Found at i:37575 original size:8 final size:8
Alignment explanation
Indices: 37564--37617 Score: 57
Period size: 8 Copynumber: 7.5 Consensus size: 8
37554 GACCCGACCC
37564 GACCCGTT
1 GACCCGTT
37572 GACCC---
1 GACCCGTT
37577 GA-CCGTT
1 GACCCGTT
37584 GACCCGTT
1 GACCCGTT
*
37592 GA-CTGTT
1 GACCCGTT
37599 GACCCGTT
1 GACCCGTT
37607 GA-CCGTT
1 GACCCGTT
37614 GACC
1 GACC
37618 AAAACTTTGA
Statistics
Matches: 38, Mismatches: 2, Indels: 12
0.73 0.04 0.23
Matches are distributed among these distances:
4 2 0.05
5 2 0.05
7 15 0.39
8 19 0.50
ACGTcount: A:0.15, C:0.35, G:0.26, T:0.24
Consensus pattern (8 bp):
GACCCGTT
Found at i:37580 original size:13 final size:13
Alignment explanation
Indices: 37516--37564 Score: 80
Period size: 13 Copynumber: 3.8 Consensus size: 13
37506 ACCGGTCATA
37516 ACCCGACCCGTTT
1 ACCCGACCCGTTT
37529 ACCCGACCCGTTT
1 ACCCGACCCGTTT
* *
37542 ACCCGACCAGTTG
1 ACCCGACCCGTTT
37555 ACCCGACCCG
1 ACCCGACCCG
37565 ACCCGTTGAC
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 33 1.00
ACGTcount: A:0.18, C:0.47, G:0.18, T:0.16
Consensus pattern (13 bp):
ACCCGACCCGTTT
Found at i:37599 original size:7 final size:7
Alignment explanation
Indices: 37577--37617 Score: 55
Period size: 7 Copynumber: 5.6 Consensus size: 7
37567 CCGTTGACCC
37577 GACCGTT
1 GACCGTT
37584 GACCCGTT
1 GA-CCGTT
*
37592 GACTGTT
1 GACCGTT
37599 GACCCGTT
1 GA-CCGTT
37607 GACCGTT
1 GACCGTT
37614 GACC
1 GACC
37618 AAAACTTTGA
Statistics
Matches: 30, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
7 17 0.57
8 13 0.43
ACGTcount: A:0.15, C:0.32, G:0.27, T:0.27
Consensus pattern (7 bp):
GACCGTT
Found at i:37601 original size:15 final size:15
Alignment explanation
Indices: 37577--37617 Score: 73
Period size: 15 Copynumber: 2.7 Consensus size: 15
37567 CCGTTGACCC
37577 GACCGTTGACCCGTT
1 GACCGTTGACCCGTT
*
37592 GACTGTTGACCCGTT
1 GACCGTTGACCCGTT
37607 GACCGTTGACC
1 GACCGTTGACC
37618 AAAACTTTGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
15 24 1.00
ACGTcount: A:0.15, C:0.32, G:0.27, T:0.27
Consensus pattern (15 bp):
GACCGTTGACCCGTT
Found at i:40141 original size:12 final size:12
Alignment explanation
Indices: 40121--40190 Score: 79
Period size: 12 Copynumber: 5.8 Consensus size: 12
40111 GATAAATGAC
*
40121 CTGAATTCTGTT
1 CTGATTTCTGTT
*
40133 CTGATTTCTGAT
1 CTGATTTCTGTT
40145 CTGGA-TTCTGTT
1 CT-GATTTCTGTT
*
40157 CTGATATCTGTT
1 CTGATTTCTGTT
*
40169 CTGAATTCTGTT
1 CTGATTTCTGTT
*
40181 TTGATTTCTG
1 CTGATTTCTG
40191 ATATCTTCGT
Statistics
Matches: 48, Mismatches: 8, Indels: 4
0.80 0.13 0.07
Matches are distributed among these distances:
11 2 0.04
12 44 0.92
13 2 0.04
ACGTcount: A:0.14, C:0.16, G:0.19, T:0.51
Consensus pattern (12 bp):
CTGATTTCTGTT
Found at i:40152 original size:24 final size:24
Alignment explanation
Indices: 40084--40192 Score: 112
Period size: 24 Copynumber: 4.5 Consensus size: 24
40074 AAATATTTTA
*
40084 TCTGATTTCCGA-CTTGAATTCTGT
1 TCTGATTTCTGATC-TGAATTCTGT
* *** *
40108 TATGATAAATGACCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
40132 TCTGATTTCTGATCTGGATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
* *
40156 TCTGATATCTGTTCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
40180 TTTGATTTCTGAT
1 TCTGATTTCTGAT
40193 ATCTTCGTTT
Statistics
Matches: 67, Mismatches: 17, Indels: 2
0.78 0.20 0.02
Matches are distributed among these distances:
24 66 0.99
25 1 0.01
ACGTcount: A:0.19, C:0.16, G:0.17, T:0.48
Consensus pattern (24 bp):
TCTGATTTCTGATCTGAATTCTGT
Found at i:42356 original size:18 final size:18
Alignment explanation
Indices: 42333--42371 Score: 69
Period size: 18 Copynumber: 2.2 Consensus size: 18
42323 CGACCCGTTT
42333 ACCCGACCAGTTGACCCG
1 ACCCGACCAGTTGACCCG
*
42351 ACCCGACCCGTTGACCCG
1 ACCCGACCAGTTGACCCG
42369 ACC
1 ACC
42372 GTTGACCCGT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.21, C:0.49, G:0.21, T:0.10
Consensus pattern (18 bp):
ACCCGACCAGTTGACCCG
Found at i:42356 original size:31 final size:30
Alignment explanation
Indices: 42320--42380 Score: 104
Period size: 31 Copynumber: 2.0 Consensus size: 30
42310 CGACCCGTTT
*
42320 ACCCGACCCGTTTACCCGACCAGTTGACCCG
1 ACCCGACCCGTTGACCCGACC-GTTGACCCG
42351 ACCCGACCCGTTGACCCGACCGTTGACCCG
1 ACCCGACCCGTTGACCCGACCGTTGACCCG
42381 TTGACTGTTG
Statistics
Matches: 29, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
30 9 0.31
31 20 0.69
ACGTcount: A:0.18, C:0.46, G:0.21, T:0.15
Consensus pattern (30 bp):
ACCCGACCCGTTGACCCGACCGTTGACCCG
Found at i:42366 original size:8 final size:8
Alignment explanation
Indices: 42355--42408 Score: 57
Period size: 8 Copynumber: 7.5 Consensus size: 8
42345 GACCCGACCC
42355 GACCCGTT
1 GACCCGTT
42363 GACCC---
1 GACCCGTT
42368 GA-CCGTT
1 GACCCGTT
42375 GACCCGTT
1 GACCCGTT
*
42383 GA-CTGTT
1 GACCCGTT
42390 GACCCGTT
1 GACCCGTT
42398 GA-CCGTT
1 GACCCGTT
42405 GACC
1 GACC
42409 GGAGTTGACC
Statistics
Matches: 38, Mismatches: 2, Indels: 12
0.73 0.04 0.23
Matches are distributed among these distances:
4 2 0.05
5 2 0.05
7 15 0.39
8 19 0.50
ACGTcount: A:0.15, C:0.35, G:0.26, T:0.24
Consensus pattern (8 bp):
GACCCGTT
Found at i:42371 original size:13 final size:13
Alignment explanation
Indices: 42307--42355 Score: 80
Period size: 13 Copynumber: 3.8 Consensus size: 13
42297 ACCGGTCATA
42307 ACCCGACCCGTTT
1 ACCCGACCCGTTT
42320 ACCCGACCCGTTT
1 ACCCGACCCGTTT
* *
42333 ACCCGACCAGTTG
1 ACCCGACCCGTTT
42346 ACCCGACCCG
1 ACCCGACCCG
42356 ACCCGTTGAC
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 33 1.00
ACGTcount: A:0.18, C:0.47, G:0.18, T:0.16
Consensus pattern (13 bp):
ACCCGACCCGTTT
Found at i:42390 original size:7 final size:7
Alignment explanation
Indices: 42368--42409 Score: 57
Period size: 7 Copynumber: 5.7 Consensus size: 7
42358 CCGTTGACCC
42368 GACCGTT
1 GACCGTT
42375 GACCCGTT
1 GA-CCGTT
*
42383 GACTGTT
1 GACCGTT
42390 GACCCGTT
1 GA-CCGTT
42398 GACCGTT
1 GACCGTT
42405 GACCG
1 GACCG
42410 GAGTTGACCA
Statistics
Matches: 31, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
7 18 0.58
8 13 0.42
ACGTcount: A:0.14, C:0.31, G:0.29, T:0.26
Consensus pattern (7 bp):
GACCGTT
Found at i:42392 original size:15 final size:15
Alignment explanation
Indices: 42368--42408 Score: 73
Period size: 15 Copynumber: 2.7 Consensus size: 15
42358 CCGTTGACCC
42368 GACCGTTGACCCGTT
1 GACCGTTGACCCGTT
*
42383 GACTGTTGACCCGTT
1 GACCGTTGACCCGTT
42398 GACCGTTGACC
1 GACCGTTGACC
42409 GGAGTTGACC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
15 24 1.00
ACGTcount: A:0.15, C:0.32, G:0.27, T:0.27
Consensus pattern (15 bp):
GACCGTTGACCCGTT
Found at i:44952 original size:12 final size:12
Alignment explanation
Indices: 44932--45001 Score: 79
Period size: 12 Copynumber: 5.8 Consensus size: 12
44922 GATAAATGAC
*
44932 CTGAATTCTGTT
1 CTGATTTCTGTT
*
44944 CTGATTTCTGAT
1 CTGATTTCTGTT
44956 CTGGA-TTCTGTT
1 CT-GATTTCTGTT
*
44968 CTGATATCTGTT
1 CTGATTTCTGTT
*
44980 CTGAATTCTGTT
1 CTGATTTCTGTT
*
44992 TTGATTTCTG
1 CTGATTTCTG
45002 ATATCTTCGT
Statistics
Matches: 48, Mismatches: 8, Indels: 4
0.80 0.13 0.07
Matches are distributed among these distances:
11 2 0.04
12 44 0.92
13 2 0.04
ACGTcount: A:0.14, C:0.16, G:0.19, T:0.51
Consensus pattern (12 bp):
CTGATTTCTGTT
Found at i:44963 original size:24 final size:24
Alignment explanation
Indices: 44895--45003 Score: 112
Period size: 24 Copynumber: 4.5 Consensus size: 24
44885 AAATATTTTA
*
44895 TCTGATTTCCGA-CTTGAATTCTGT
1 TCTGATTTCTGATC-TGAATTCTGT
* *** *
44919 TATGATAAATGACCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
44943 TCTGATTTCTGATCTGGATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
* *
44967 TCTGATATCTGTTCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
44991 TTTGATTTCTGAT
1 TCTGATTTCTGAT
45004 ATCTTCGTTT
Statistics
Matches: 67, Mismatches: 17, Indels: 2
0.78 0.20 0.02
Matches are distributed among these distances:
24 66 0.99
25 1 0.01
ACGTcount: A:0.19, C:0.16, G:0.17, T:0.48
Consensus pattern (24 bp):
TCTGATTTCTGATCTGAATTCTGT
Found at i:47169 original size:18 final size:18
Alignment explanation
Indices: 47146--47184 Score: 69
Period size: 18 Copynumber: 2.2 Consensus size: 18
47136 CGACCCGTTT
47146 ACCCGACCAGTTGACCCG
1 ACCCGACCAGTTGACCCG
*
47164 ACCCGACCCGTTGACCCG
1 ACCCGACCAGTTGACCCG
47182 ACC
1 ACC
47185 GTTGACCCGT
Statistics
Matches: 20, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
18 20 1.00
ACGTcount: A:0.21, C:0.49, G:0.21, T:0.10
Consensus pattern (18 bp):
ACCCGACCAGTTGACCCG
Found at i:47169 original size:31 final size:30
Alignment explanation
Indices: 47133--47193 Score: 104
Period size: 31 Copynumber: 2.0 Consensus size: 30
47123 CGACCCGTTT
*
47133 ACCCGACCCGTTTACCCGACCAGTTGACCCG
1 ACCCGACCCGTTGACCCGACC-GTTGACCCG
47164 ACCCGACCCGTTGACCCGACCGTTGACCCG
1 ACCCGACCCGTTGACCCGACCGTTGACCCG
47194 TTGACTGTTG
Statistics
Matches: 29, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
30 9 0.31
31 20 0.69
ACGTcount: A:0.18, C:0.46, G:0.21, T:0.15
Consensus pattern (30 bp):
ACCCGACCCGTTGACCCGACCGTTGACCCG
Found at i:47179 original size:8 final size:8
Alignment explanation
Indices: 47168--47221 Score: 57
Period size: 8 Copynumber: 7.5 Consensus size: 8
47158 GACCCGACCC
47168 GACCCGTT
1 GACCCGTT
47176 GACCC---
1 GACCCGTT
47181 GA-CCGTT
1 GACCCGTT
47188 GACCCGTT
1 GACCCGTT
*
47196 GA-CTGTT
1 GACCCGTT
47203 GACCCGTT
1 GACCCGTT
47211 GA-CCGTT
1 GACCCGTT
47218 GACC
1 GACC
47222 GGAGTTGACC
Statistics
Matches: 38, Mismatches: 2, Indels: 12
0.73 0.04 0.23
Matches are distributed among these distances:
4 2 0.05
5 2 0.05
7 15 0.39
8 19 0.50
ACGTcount: A:0.15, C:0.35, G:0.26, T:0.24
Consensus pattern (8 bp):
GACCCGTT
Found at i:47184 original size:13 final size:13
Alignment explanation
Indices: 47120--47168 Score: 80
Period size: 13 Copynumber: 3.8 Consensus size: 13
47110 ACCGGTCATA
47120 ACCCGACCCGTTT
1 ACCCGACCCGTTT
47133 ACCCGACCCGTTT
1 ACCCGACCCGTTT
* *
47146 ACCCGACCAGTTG
1 ACCCGACCCGTTT
47159 ACCCGACCCG
1 ACCCGACCCG
47169 ACCCGTTGAC
Statistics
Matches: 33, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
13 33 1.00
ACGTcount: A:0.18, C:0.47, G:0.18, T:0.16
Consensus pattern (13 bp):
ACCCGACCCGTTT
Found at i:47203 original size:7 final size:7
Alignment explanation
Indices: 47181--47222 Score: 57
Period size: 7 Copynumber: 5.7 Consensus size: 7
47171 CCGTTGACCC
47181 GACCGTT
1 GACCGTT
47188 GACCCGTT
1 GA-CCGTT
*
47196 GACTGTT
1 GACCGTT
47203 GACCCGTT
1 GA-CCGTT
47211 GACCGTT
1 GACCGTT
47218 GACCG
1 GACCG
47223 GAGTTGACCA
Statistics
Matches: 31, Mismatches: 2, Indels: 4
0.84 0.05 0.11
Matches are distributed among these distances:
7 18 0.58
8 13 0.42
ACGTcount: A:0.14, C:0.31, G:0.29, T:0.26
Consensus pattern (7 bp):
GACCGTT
Found at i:47205 original size:15 final size:15
Alignment explanation
Indices: 47181--47221 Score: 73
Period size: 15 Copynumber: 2.7 Consensus size: 15
47171 CCGTTGACCC
47181 GACCGTTGACCCGTT
1 GACCGTTGACCCGTT
*
47196 GACTGTTGACCCGTT
1 GACCGTTGACCCGTT
47211 GACCGTTGACC
1 GACCGTTGACC
47222 GGAGTTGACC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
15 24 1.00
ACGTcount: A:0.15, C:0.32, G:0.27, T:0.27
Consensus pattern (15 bp):
GACCGTTGACCCGTT
Found at i:49764 original size:12 final size:12
Alignment explanation
Indices: 49744--49813 Score: 79
Period size: 12 Copynumber: 5.8 Consensus size: 12
49734 GATAAATGAC
*
49744 CTGAATTCTGTT
1 CTGATTTCTGTT
*
49756 CTGATTTCTGAT
1 CTGATTTCTGTT
49768 CTGGA-TTCTGTT
1 CT-GATTTCTGTT
*
49780 CTGATATCTGTT
1 CTGATTTCTGTT
*
49792 CTGAATTCTGTT
1 CTGATTTCTGTT
*
49804 TTGATTTCTG
1 CTGATTTCTG
49814 ATATCTTCGT
Statistics
Matches: 48, Mismatches: 8, Indels: 4
0.80 0.13 0.07
Matches are distributed among these distances:
11 2 0.04
12 44 0.92
13 2 0.04
ACGTcount: A:0.14, C:0.16, G:0.19, T:0.51
Consensus pattern (12 bp):
CTGATTTCTGTT
Found at i:49775 original size:24 final size:24
Alignment explanation
Indices: 49707--49815 Score: 112
Period size: 24 Copynumber: 4.5 Consensus size: 24
49697 AAATATTTTA
*
49707 TCTGATTTCCGA-CTTGAATTCTGT
1 TCTGATTTCTGATC-TGAATTCTGT
* *** *
49731 TATGATAAATGACCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
49755 TCTGATTTCTGATCTGGATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
* *
49779 TCTGATATCTGTTCTGAATTCTGT
1 TCTGATTTCTGATCTGAATTCTGT
*
49803 TTTGATTTCTGAT
1 TCTGATTTCTGAT
49816 ATCTTCGTTT
Statistics
Matches: 67, Mismatches: 17, Indels: 2
0.78 0.20 0.02
Matches are distributed among these distances:
24 66 0.99
25 1 0.01
ACGTcount: A:0.19, C:0.16, G:0.17, T:0.48
Consensus pattern (24 bp):
TCTGATTTCTGATCTGAATTCTGT
Found at i:50959 original size:2 final size:2
Alignment explanation
Indices: 50952--51001 Score: 100
Period size: 2 Copynumber: 25.0 Consensus size: 2
50942 CAGCTAAAGC
50952 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
1 TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA TA
50994 TA TA TA TA
1 TA TA TA TA
51002 ATCAATTGGC
Statistics
Matches: 48, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
2 48 1.00
ACGTcount: A:0.50, C:0.00, G:0.00, T:0.50
Consensus pattern (2 bp):
TA
Found at i:51564 original size:64 final size:65
Alignment explanation
Indices: 51459--51603 Score: 179
Period size: 65 Copynumber: 2.2 Consensus size: 65
51449 TTTCAGAGTG
* *
51459 ATGCATCGATGCACCAATCCATGCATCGATGCACCATGAATTAAATTG-AACATCGAATGCATTT
1 ATGCATCGATGCACTAATCCATGCACCGATGCACCATGAATTAAA-TGAAACATCGAATGCATTT
51523 C
65 C
* * **
51524 ATGCATCGATGCACTTA-CCATGCACCGATGCACTGA-GAATTTTATGAAAACATCGAATGCATT
1 ATGCATCGATGCACTAATCCATGCACCGATGCAC-CATGAATTAAATG-AAACATCGAATGCATT
*
51587 TG
64 TC
51589 ATGCATCGATGCACT
1 ATGCATCGATGCACT
51604 CTGGCTATTT
Statistics
Matches: 70, Mismatches: 7, Indels: 6
0.84 0.08 0.07
Matches are distributed among these distances:
63 2 0.03
64 21 0.30
65 47 0.67
ACGTcount: A:0.32, C:0.23, G:0.17, T:0.27
Consensus pattern (65 bp):
ATGCATCGATGCACTAATCCATGCACCGATGCACCATGAATTAAATGAAACATCGAATGCATTTC
Found at i:51599 original size:46 final size:45
Alignment explanation
Indices: 51543--51649 Score: 135
Period size: 45 Copynumber: 2.4 Consensus size: 45
51533 TGCACTTACC
* * *
51543 ATGCACCGATGCACTGAGAAT-TTTATGAAAACATCGAATGCATTTG
1 ATGCATCGATGCACTCAGAATATTT-TG-AAACATCGAATGCACTTG
* **
51589 ATGCATCGATGCACTCTGGCTATTTTGAAACATCGAATGCACTTG
1 ATGCATCGATGCACTCAGAATATTTTGAAACATCGAATGCACTTG
51634 ATGCATCGATGCACTC
1 ATGCATCGATGCACTC
51650 TTAGTGCATC
Statistics
Matches: 54, Mismatches: 6, Indels: 3
0.86 0.10 0.05
Matches are distributed among these distances:
45 33 0.61
46 18 0.33
47 3 0.06
ACGTcount: A:0.30, C:0.21, G:0.20, T:0.29
Consensus pattern (45 bp):
ATGCATCGATGCACTCAGAATATTTTGAAACATCGAATGCACTTG
Found at i:51647 original size:17 final size:19
Alignment explanation
Indices: 51619--51667 Score: 66
Period size: 19 Copynumber: 2.6 Consensus size: 19
51609 TATTTTGAAA
51619 CATCGAATGCACT-TGA-TG
1 CATCG-ATGCACTCTGAGTG
*
51637 CATCGATGCACTCTTAGTG
1 CATCGATGCACTCTGAGTG
51656 CATCGATGCACT
1 CATCGATGCACT
51668 AAGGGTCCAA
Statistics
Matches: 28, Mismatches: 1, Indels: 3
0.88 0.03 0.09
Matches are distributed among these distances:
17 7 0.25
18 7 0.25
19 14 0.50
ACGTcount: A:0.24, C:0.27, G:0.20, T:0.29
Consensus pattern (19 bp):
CATCGATGCACTCTGAGTG
Found at i:52686 original size:28 final size:27
Alignment explanation
Indices: 52629--52687 Score: 64
Period size: 27 Copynumber: 2.1 Consensus size: 27
52619 TTAACCTCTA
* * *
52629 TTTTATTTTTTATTTTAATTTAGTCAT
1 TTTTATATTTTATTCTAATTTAATCAT
* *
52656 TTTTATATTTTATTCCTATTTTAATCTT
1 TTTTATATTTTATT-CTAATTTAATCAT
52684 TTTT
1 TTTT
52688 CCTTTTTATT
Statistics
Matches: 26, Mismatches: 5, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
27 13 0.50
28 13 0.50
ACGTcount: A:0.20, C:0.07, G:0.02, T:0.71
Consensus pattern (27 bp):
TTTTATATTTTATTCTAATTTAATCAT
Found at i:56163 original size:10 final size:11
Alignment explanation
Indices: 56132--56172 Score: 50
Period size: 11 Copynumber: 3.8 Consensus size: 11
56122 CTTTTGGATT
*
56132 TTTTTATTGTTA
1 TTTTTATT-TTC
56144 TTTTTA-TTTC
1 TTTTTATTTTC
56154 -TTTTATTTTC
1 TTTTTATTTTC
56164 TTTTTATTT
1 TTTTTATTT
56173 CATTTGGCTT
Statistics
Matches: 26, Mismatches: 1, Indels: 5
0.81 0.03 0.16
Matches are distributed among these distances:
9 5 0.19
10 6 0.23
11 9 0.35
12 6 0.23
ACGTcount: A:0.12, C:0.05, G:0.02, T:0.80
Consensus pattern (11 bp):
TTTTTATTTTC
Found at i:56167 original size:20 final size:20
Alignment explanation
Indices: 56114--56173 Score: 70
Period size: 20 Copynumber: 3.0 Consensus size: 20
56104 TATATATATA
*
56114 TTTT-TTTTCTTTTGGATTT-
1 TTTTATTTTCTTTT-TATTTC
*
56133 TTTTATTGTTATTTTTATTTC
1 TTTTATT-TTCTTTTTATTTC
56154 TTTTATTTTCTTTTTATTTC
1 TTTTATTTTCTTTTTATTTC
56174 ATTTGGCTTG
Statistics
Matches: 35, Mismatches: 3, Indels: 5
0.81 0.07 0.12
Matches are distributed among these distances:
19 4 0.11
20 18 0.51
21 13 0.37
ACGTcount: A:0.10, C:0.07, G:0.05, T:0.78
Consensus pattern (20 bp):
TTTTATTTTCTTTTTATTTC
Found at i:57102 original size:32 final size:32
Alignment explanation
Indices: 57061--57125 Score: 94
Period size: 32 Copynumber: 2.0 Consensus size: 32
57051 CTTAATAAAC
* * * *
57061 GGTTAAAAAAAGGTGGTATCAGTTTTGTTATT
1 GGTTAAAAAAAGGCGGTACCAATTTTATTATT
57093 GGTTAAAAAAAGGCGGTACCAATTTTATTATT
1 GGTTAAAAAAAGGCGGTACCAATTTTATTATT
57125 G
1 G
57126 TTGTGCATAA
Statistics
Matches: 29, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
32 29 1.00
ACGTcount: A:0.34, C:0.06, G:0.23, T:0.37
Consensus pattern (32 bp):
GGTTAAAAAAAGGCGGTACCAATTTTATTATT
Found at i:57364 original size:21 final size:21
Alignment explanation
Indices: 57340--57380 Score: 64
Period size: 21 Copynumber: 2.0 Consensus size: 21
57330 AAATGGTAAA
*
57340 AAATATTAATGTGTTAGGTAG
1 AAATAATAATGTGTTAGGTAG
*
57361 AAATAATAATGTTTTAGGTA
1 AAATAATAATGTGTTAGGTA
57381 ATTTTTACCG
Statistics
Matches: 18, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
21 18 1.00
ACGTcount: A:0.41, C:0.00, G:0.20, T:0.39
Consensus pattern (21 bp):
AAATAATAATGTGTTAGGTAG
Found at i:58563 original size:25 final size:24
Alignment explanation
Indices: 58521--58597 Score: 66
Period size: 25 Copynumber: 3.0 Consensus size: 24
58511 TTAATATTAT
*
58521 TTATATCAATATTATTATTAAAATA
1 TTATATCTATATT-TTATTAAAATA
58546 TTATATCTATAATTTTATAAATAAAATTA
1 TTATATCTAT-ATTTTAT---TAAAA-TA
* *
58575 TGATAT-TATATTTTGTTAAAATA
1 TTATATCTATATTTTATTAAAATA
58598 AAATTATTAT
Statistics
Matches: 44, Mismatches: 3, Indels: 12
0.75 0.05 0.20
Matches are distributed among these distances:
23 2 0.05
24 5 0.11
25 13 0.30
26 3 0.07
27 6 0.14
28 8 0.18
29 7 0.16
ACGTcount: A:0.45, C:0.03, G:0.03, T:0.49
Consensus pattern (24 bp):
TTATATCTATATTTTATTAAAATA
Found at i:60074 original size:24 final size:24
Alignment explanation
Indices: 60047--60114 Score: 70
Period size: 24 Copynumber: 2.8 Consensus size: 24
60037 TTAACAAAAT
60047 AATAATATTATTTTAAAATA-TTA
1 AATAATATTATTTTAAAATATTTA
60070 GAATAAT-TTA-TTTAATAATATTTA
1 -AATAATATTATTTTAA-AATATTTA
*
60094 TATCAATATTATTATTAAAAT
1 AAT-AATATTATT-TTAAAAT
60115 GTTATATCTA
Statistics
Matches: 37, Mismatches: 1, Indels: 10
0.77 0.02 0.21
Matches are distributed among these distances:
22 5 0.14
23 9 0.24
24 12 0.32
25 3 0.08
26 4 0.11
27 4 0.11
ACGTcount: A:0.49, C:0.01, G:0.01, T:0.49
Consensus pattern (24 bp):
AATAATATTATTTTAAAATATTTA
Found at i:60119 original size:25 final size:24
Alignment explanation
Indices: 60050--60122 Score: 62
Period size: 24 Copynumber: 3.0 Consensus size: 24
60040 ACAAAATAAT
*
60050 AATATTATT-TTAAAATATTAGAAT-
1 AATATTATTATTAAAAT-TTA-TATC
* *
60074 AAT-TTATTTAATAATATTTATATC
1 AATATTA-TTATTAAAATTTATATC
60098 AATATTATTATTAAAATGTTATATC
1 AATATTATTATTAAAAT-TTATATC
60123 TAAAATTTTA
Statistics
Matches: 39, Mismatches: 5, Indels: 9
0.74 0.09 0.17
Matches are distributed among these distances:
23 5 0.13
24 19 0.49
25 15 0.38
ACGTcount: A:0.45, C:0.03, G:0.03, T:0.49
Consensus pattern (24 bp):
AATATTATTATTAAAATTTATATC
Found at i:60878 original size:14 final size:14
Alignment explanation
Indices: 60861--60946 Score: 52
Period size: 14 Copynumber: 6.2 Consensus size: 14
60851 TATTTATATC
60861 AATATTATTATTAA
1 AATATTATTATTAA
*
60875 AATATTA-TATCTAT
1 AATATTATTAT-TAA
* *
60889 AATTTTATTAATAA
1 AATATTATTATTAA
* *
60903 AA-ATTATGATTAT
1 AATATTATTATTAA
* *
60916 TATATT-TTGTTAA
1 AATATTATTATTAA
**
60929 AATAAAATTATTATA
1 AATATTATTATTA-A
60944 AAT
1 AAT
60947 TATATTTATT
Statistics
Matches: 51, Mismatches: 16, Indels: 9
0.67 0.21 0.12
Matches are distributed among these distances:
13 18 0.35
14 27 0.53
15 6 0.12
ACGTcount: A:0.48, C:0.01, G:0.02, T:0.49
Consensus pattern (14 bp):
AATATTATTATTAA
Found at i:61620 original size:20 final size:22
Alignment explanation
Indices: 61582--61623 Score: 61
Period size: 20 Copynumber: 2.0 Consensus size: 22
61572 TTAACAAAAT
61582 AATAATATTATTTAAAATATTAG
1 AATAATATTATTT-AAATATTAG
61605 AATAAT-TTATTT-AATATTA
1 AATAATATTATTTAAATATTA
61624 TTTATCATAT
Statistics
Matches: 19, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
20 7 0.37
22 6 0.32
23 6 0.32
ACGTcount: A:0.50, C:0.00, G:0.02, T:0.48
Consensus pattern (22 bp):
AATAATATTATTTAAATATTAG
Found at i:62392 original size:20 final size:22
Alignment explanation
Indices: 62354--62395 Score: 61
Period size: 20 Copynumber: 2.0 Consensus size: 22
62344 TTAACAAAAT
62354 AATAATATTATTTAAAATATTAG
1 AATAATATTATTT-AAATATTAG
62377 AATAAT-TTATTT-AATATTA
1 AATAATATTATTTAAATATTA
62396 CTTATATCAA
Statistics
Matches: 19, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
20 7 0.37
22 6 0.32
23 6 0.32
ACGTcount: A:0.50, C:0.00, G:0.02, T:0.48
Consensus pattern (22 bp):
AATAATATTATTTAAATATTAG
Found at i:62439 original size:25 final size:25
Alignment explanation
Indices: 62397--62476 Score: 65
Period size: 25 Copynumber: 3.0 Consensus size: 25
62387 TTAATATTAC
*
62397 TTATATCAAT-ATTATTATTAAAATA
1 TTATATCTATAATT-TTATTAAAATA
* *
62422 TTATATCTATAATTTTATAAATTAAAA
1 TTATATCTATAATTTTATTAA--AATA
62449 TTATGAT-TATTATATTTTATTAAAATA
1 TTAT-ATCTA-TA-ATTTTATTAAAATA
62476 T
1 T
62477 AATTATTATA
Statistics
Matches: 44, Mismatches: 5, Indels: 10
0.75 0.08 0.17
Matches are distributed among these distances:
25 15 0.34
26 3 0.07
27 13 0.30
28 4 0.09
29 9 0.20
ACGTcount: A:0.45, C:0.03, G:0.01, T:0.51
Consensus pattern (25 bp):
TTATATCTATAATTTTATTAAAATA
Found at i:62492 original size:24 final size:24
Alignment explanation
Indices: 62404--62492 Score: 71
Period size: 24 Copynumber: 3.9 Consensus size: 24
62394 TACTTATATC
*
62404 AATATTATTATTA-AAA-TATTATA
1 AATATAATTATTATAAATTATTA-A
**
62427 TCTATAATT-TTATAAATTA--AA
1 AATATAATTATTATAAATTATTAA
* * **
62448 ATTATGATTATTATATTTTATTAA
1 AATATAATTATTATAAATTATTAA
62472 AATATAATTATTATAAATTAT
1 AATATAATTATTATAAATTAT
62493 ATTTATTATT
Statistics
Matches: 49, Mismatches: 12, Indels: 9
0.70 0.17 0.13
Matches are distributed among these distances:
21 7 0.14
22 12 0.24
23 9 0.18
24 21 0.43
ACGTcount: A:0.47, C:0.01, G:0.01, T:0.51
Consensus pattern (24 bp):
AATATAATTATTATAAATTATTAA
Found at i:62493 original size:16 final size:16
Alignment explanation
Indices: 62429--62511 Score: 66
Period size: 16 Copynumber: 5.4 Consensus size: 16
62419 ATATTATATC
62429 TATAATT-TTATAAAT
1 TATAATTATTATAAAT
* * *
62444 TAAAATTATGAT-TAT
1 TATAATTATTATAAAT
*
62459 TAT-ATT-TTATTAAAA
1 TATAATTATTA-TAAAT
62474 TATAATTATTATAAAT
1 TATAATTATTATAAAT
* **
62490 TATATTTATTATTTAT
1 TATAATTATTATAAAT
62506 TATAAT
1 TATAAT
62512 AAAAATATTA
Statistics
Matches: 51, Mismatches: 12, Indels: 9
0.71 0.17 0.12
Matches are distributed among these distances:
13 2 0.04
14 4 0.08
15 14 0.27
16 28 0.55
17 3 0.06
ACGTcount: A:0.45, C:0.00, G:0.01, T:0.54
Consensus pattern (16 bp):
TATAATTATTATAAAT
Found at i:62533 original size:26 final size:26
Alignment explanation
Indices: 62476--62535 Score: 68
Period size: 26 Copynumber: 2.3 Consensus size: 26
62466 TATTAAAATA
* * *
62476 TAATTATTATAAATTATATTTATTAT
1 TAATTATAATAAATAATATTTATCAT
*
62502 TTATTATAATAAA-AATATTATATCAT
1 TAATTATAATAAATAATATT-TATCAT
62528 TAATTATA
1 TAATTATA
62536 TTATAATGAG
Statistics
Matches: 28, Mismatches: 5, Indels: 2
0.80 0.14 0.06
Matches are distributed among these distances:
25 5 0.18
26 23 0.82
ACGTcount: A:0.47, C:0.02, G:0.00, T:0.52
Consensus pattern (26 bp):
TAATTATAATAAATAATATTTATCAT
Found at i:63227 original size:29 final size:30
Alignment explanation
Indices: 63189--63256 Score: 77
Period size: 30 Copynumber: 2.3 Consensus size: 30
63179 TTAAATATAT
*
63189 TTATAATTTT-ATAAATACAAATTATGAT-TA
1 TTAT-ATTTTGATAAATA-AAATTATGATAAA
* *
63219 TTATATTTTGTTAAATAAAATTATTATAAA
1 TTATATTTTGATAAATAAAATTATGATAAA
63249 TTATATTT
1 TTATATTT
63257 ATTATTTATT
Statistics
Matches: 33, Mismatches: 3, Indels: 4
0.82 0.08 0.10
Matches are distributed among these distances:
29 14 0.42
30 19 0.58
ACGTcount: A:0.44, C:0.01, G:0.03, T:0.51
Consensus pattern (30 bp):
TTATATTTTGATAAATAAAATTATGATAAA
Found at i:63252 original size:30 final size:30
Alignment explanation
Indices: 63200--63256 Score: 80
Period size: 30 Copynumber: 1.9 Consensus size: 30
63190 TATAATTTTA
*
63200 TAAATACAAATTATGATTATTATATTTTGT
1 TAAATACAAATTATGATAATTATATTTTGT
*
63230 TAAATA-AAATTATTATAAATTATATTT
1 TAAATACAAATTATGAT-AATTATATTT
63257 ATTATTTATT
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
29 9 0.38
30 15 0.62
ACGTcount: A:0.46, C:0.02, G:0.04, T:0.49
Consensus pattern (30 bp):
TAAATACAAATTATGATAATTATATTTTGT
Found at i:63879 original size:24 final size:25
Alignment explanation
Indices: 63852--63919 Score: 74
Period size: 24 Copynumber: 2.9 Consensus size: 25
63842 AACATCAAAT
63852 ACAATAA-AATAATATTATTTATTA
1 ACAATAAGAATAATATTATTTATTA
*
63876 ACAA-AATAATAATATTA-TT-TTA
1 ACAATAAGAATAATATTATTTATTA
*
63898 AAATATAAGAATAAT-TTATTTA
1 ACA-ATAAGAATAATATTATTTA
63920 ATATATTTAT
Statistics
Matches: 37, Mismatches: 2, Indels: 9
0.77 0.04 0.19
Matches are distributed among these distances:
22 5 0.14
23 8 0.22
24 24 0.65
ACGTcount: A:0.54, C:0.03, G:0.01, T:0.41
Consensus pattern (25 bp):
ACAATAAGAATAATATTATTTATTA
Found at i:64766 original size:29 final size:29
Alignment explanation
Indices: 64717--64777 Score: 70
Period size: 29 Copynumber: 2.1 Consensus size: 29
64707 AAAATATATC
*
64717 TATAATTTATAAATAAAAATTATGATTAT
1 TATAATTTATAAATAAAAATTATGATAAT
* * *
64746 TATATTTTATTAAAT-ATAATTATTATAAT
1 TATAATTTA-TAAATAAAAATTATGATAAT
64775 TAT
1 TAT
64778 TTTATTTTAT
Statistics
Matches: 27, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
29 22 0.81
30 5 0.19
ACGTcount: A:0.48, C:0.00, G:0.02, T:0.51
Consensus pattern (29 bp):
TATAATTTATAAATAAAAATTATGATAAT
Found at i:64777 original size:32 final size:32
Alignment explanation
Indices: 64697--64817 Score: 106
Period size: 32 Copynumber: 3.8 Consensus size: 32
64687 TACTTATATC
* *
64697 ATAT-ATTATTAAAATATATCTATAATTTA-TAA
1 ATATAATTATTATAAT-TAT-TATATTTTATTAA
* *
64729 ATA-AA-AATTATGATTATTATATTTTATTAA
1 ATATAATTATTATAATTATTATATTTTATTAA
*
64759 ATATAATTATTATAATTATTTTATTTTATTATA
1 ATATAATTATTATAATTATTATATTTTATTA-A
* * *
64792 ATAAAAATATATATCATTATTATATT
1 ATATAATTAT-TATAATTATTATATT
64818 ATAATGAGAG
Statistics
Matches: 72, Mismatches: 11, Indels: 10
0.77 0.12 0.11
Matches are distributed among these distances:
29 8 0.11
30 9 0.12
31 8 0.11
32 25 0.35
33 9 0.12
34 13 0.18
ACGTcount: A:0.46, C:0.02, G:0.01, T:0.51
Consensus pattern (32 bp):
ATATAATTATTATAATTATTATATTTTATTAA
Found at i:65482 original size:14 final size:15
Alignment explanation
Indices: 65448--65492 Score: 56
Period size: 15 Copynumber: 3.1 Consensus size: 15
65438 TAATTTATTT
* *
65448 AATATTATTTATATC
1 AATATTATTTTTATA
65463 AATATTATTTTTA-A
1 AATATTATTTTTATA
*
65477 AATATTATATTTATA
1 AATATTATTTTTATA
65492 A
1 A
65493 TTTTATAAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
14 12 0.46
15 14 0.54
ACGTcount: A:0.44, C:0.02, G:0.00, T:0.53
Consensus pattern (15 bp):
AATATTATTTTTATA
Found at i:66254 original size:14 final size:15
Alignment explanation
Indices: 66220--66264 Score: 56
Period size: 15 Copynumber: 3.1 Consensus size: 15
66210 TAATTTATTT
* *
66220 AATATTATTTATATC
1 AATATTATTTTTATA
66235 AATATTATTTTTA-A
1 AATATTATTTTTATA
*
66249 AATATTATATTTATA
1 AATATTATTTTTATA
66264 A
1 A
66265 TTTTATAAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
14 12 0.46
15 14 0.54
ACGTcount: A:0.44, C:0.02, G:0.00, T:0.53
Consensus pattern (15 bp):
AATATTATTTTTATA
Found at i:66967 original size:21 final size:21
Alignment explanation
Indices: 66943--67001 Score: 66
Period size: 21 Copynumber: 2.9 Consensus size: 21
66933 CAAATACAAT
*
66943 AAAATAATATTATTTATTAAC
1 AAAATAATAATATTTATTAAC
*
66964 AAAATAATAATATTTTTTAA-
1 AAAATAATAATATTTATTAAC
* * *
66984 AATATTAGAATATTTATT
1 AAAATAATAATATTTATT
67002 TAATATTATT
Statistics
Matches: 32, Mismatches: 6, Indels: 1
0.82 0.15 0.03
Matches are distributed among these distances:
20 14 0.44
21 18 0.56
ACGTcount: A:0.51, C:0.02, G:0.02, T:0.46
Consensus pattern (21 bp):
AAAATAATAATATTTATTAAC
Found at i:67053 original size:25 final size:25
Alignment explanation
Indices: 67011--67087 Score: 61
Period size: 25 Copynumber: 3.0 Consensus size: 25
67001 TTAATATTAT
*
67011 TTATATCAAT-ATTATTATTAAAATA
1 TTATATCTATAATT-TTATTAAAATA
*
67036 TTATATCTATAATTTTA-TAATAAAA
1 TTATATCTATAATTTTATTAA-AATA
*
67061 TTATGAT-TATTATATTTTGTTAAAATA
1 TTAT-ATCTA-TA-ATTTTATTAAAATA
67088 AAATTATTAT
Statistics
Matches: 42, Mismatches: 4, Indels: 10
0.75 0.07 0.18
Matches are distributed among these distances:
24 3 0.07
25 21 0.50
26 7 0.17
27 8 0.19
28 3 0.07
ACGTcount: A:0.44, C:0.03, G:0.03, T:0.51
Consensus pattern (25 bp):
TTATATCTATAATTTTATTAAAATA
Found at i:67125 original size:26 final size:30
Alignment explanation
Indices: 67090--67154 Score: 75
Period size: 31 Copynumber: 2.3 Consensus size: 30
67080 TTAAAATAAA
* *
67090 ATTATTAT-AAATTATAT-TTATT-ATT-T
1 ATTATAATAAAATAATATATTATTAATTAT
67116 ATTATAATAAAAATAATATATTATTAATTAT
1 ATTATAAT-AAAATAATATATTATTAATTAT
67147 ATTATAAT
1 ATTATAAT
67155 GAGAGAATAG
Statistics
Matches: 32, Mismatches: 2, Indels: 5
0.82 0.05 0.13
Matches are distributed among these distances:
26 7 0.22
28 8 0.25
29 5 0.16
30 3 0.09
31 9 0.28
ACGTcount: A:0.48, C:0.00, G:0.00, T:0.52
Consensus pattern (30 bp):
ATTATAATAAAATAATATATTATTAATTAT
Found at i:67889 original size:777 final size:780
Alignment explanation
Indices: 57302--83761 Score: 46870
Period size: 778 Copynumber: 34.1 Consensus size: 780
57292 AGCGCTACAT
* * * * *
57302 GTTTTGTTATTGTTGGGCATTTTACCGGAAATGGTAAAAAATATTAATGTGTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
57367 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCTCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
*
57432 CTTTTTATTGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
* * *
57497 TTGTCACAATATAACTAATG-AAAAAAGGACACGGTATTTATATTTCGATATTAGTTTTCTAAT-
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
57560 AA-AAAAATTATATATAATTACAATATAATTTTAAAAAATAATCATAATGAAGTGATGAAAAATA
261 AATAAAAATTATATATAATTACAATATAATTTTAAAAAA-AATCATAATGAAGTGATGAAAACTA
* ** * * * *
57624 ATCATAATTATAATATAACTATAAACATAAAAAATAATAAAATAATATTAATTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
* * *
57689 ATAATATTATTTTTAAAATATTATAATAATGTATTTAATATTATTTATGTCAATATTATTATTAA
390 ATAATATTA-TTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
* * * *
57754 AATACTATATCTATAATTTTATAAATAAAAATTTATTATTATTATATTTTATTAAAATAAAATCA
454 AATATTATATCTATAATTTTATAAATAAAAA-TTATGATTATTATATTTTGTTAAAATAAAATTA
* *
57819 TTATAAATTAGATTTATTATTTATTATAATAAGAATAATATATCATTAATTATATTATAATGAGA
518 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
* * * *
57884 GAATAATTAAACATATGCGTCGATACATTTTCCAAGAGTATCGACACATATGTTACATCGAAACC
583 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
* *
57949 GATAATTATAATGTAATAGGTAAATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
648 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
* * * * *
58014 AAATTACTGAAAACATCATTATTTTAACAAAACCGGTAAAGCGCTACCGGTTTTATTATTTTTTT
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA--TTTTT
58079 TACCG
776 TACCG
* *
58084 GTTTTGTTATTGTTGGGCATTTTACCGGAAATGTTAAAAACCATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
58149 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGTCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
* * *
58214 CTTTTTAATGATAAAATTAATAAACAGAAATTGTACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
* * *
58279 TTGCCACAATATAACTAATGAAAAAAAGGACACGATATTTCTATTTCTATATTAGCTTCCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
* * *
58344 AATAAAAAAATTATATATAATAACAATATAATTTTTTTTAAAAAAATTATAATGAAGTGATGAAA
261 AAT--AAAAATTATATATAATTACAATATAA---TTTTAAAAAAAATCATAATGAAGTGATGAAA
* *
58409 CCTACTCAAAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
321 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
58474 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
386 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
58539 TAAAATATTATATCTATAATTTTATAAAT-AAAATTATGA-TATTATATTTTGTTAAAATAAAAT
451 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
*
58602 TATTATAAATTAAATTTATTATTTATTATAAT-AAAATAATATATCATTAATTATATTATAATGA
516 TATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGA
58666 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
581 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
*
58731 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAATAAAACCGGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
58796 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTT
58861 TTACCG
775 TTACCG
58867 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAG-AATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
* * **
58931 TAAAGTTTTAGGTAATATTTACCGGTTTTGTTATGCCCAACAATAACAAAACTTGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
58996 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
* **
59061 TTGCCACAATATAACTATAACTAATGAAAAAAAGGATATTGTATTTCTATTTCGATATTAGCTTT
196 TTGCCAC-----AA-TATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTT
* *
59126 CTAATAAATAAAAAATTATATATAATTACAATATAATTTTAAAAAAAAATCATAATGAAATGATA
255 CTAATAAAT-AAAAATTATATATAATTACAATATAATTTT-AAAAAAAATCATAATGAAGTGATG
59191 AAAACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAA
318 AAAACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAA
59256 CAAAATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTAT
383 CAAAATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTAT
*
59321 TATTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATAATATTTTGTTAAAATAA
448 TATTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAA
59386 AATTATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAA
513 AATTATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAA
59451 TGAGAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCG
578 TGAGAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCG
59516 AAACCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACC
643 AAACCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACC
*
59581 GGTAAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTATTGATTTTATTATT
708 GGTAAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-T
59646 TGTTTTACCG
772 T-TTTTACCG
*
59656 GTTTTGTTATTGTTGGGCATTTTACCATAAATGTTAAAAAACCATTGATGTTTTAGGTAGAAATA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAA-CATTGATGTTTTAGGTAGAAATA
59721 ATAATG-TTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
59785 ACTTTTTAATGATAAAATTAGTAAACAC-AA-TATACAAATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
* * * *
59848 GTTGCTACAATATAACTAATGAAAAAAAAAGGAGACGTTATTTCTATTTCGATATTAGCATTCTA
195 GTTGCCACAATATAACTAATG--AAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTA
*
59913 ATAAATAAAAAAGTATATATAATTACAATATAATTTTAAAAAAAAATCATAATGAAGTGATGAAA
258 ATAAAT-AAAAATTATATATAATTACAATATAATTTT-AAAAAAAATCATAATGAAGTGATGAAA
* *
59978 ACAACTCATAATTGCAATATAACTATAAACATCAAATACAAAAAAAATAATATTATTTATTAACA
321 ACTACTCATAATTGCAATATAACTATAAACATCAAATAC-AATAAAATAATATTATTTATTAACA
*
60043 AAATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATAATATTTATATCAATATTATTA
385 AAATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTA
* * *
60108 TTAAAATGTTATATCTAAAATTTTATAAAT-AAAATTATG---ATTAT-TTTTATTAAAATAAAA
450 TTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAA
*
60168 TTATTAT-AA--ATATTTATTATTTA-TATAAT-AAAATAATATATTATTAATTATATTATAATG
515 TTATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATG
60228 AGAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAA
580 AGAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAA
*
60293 ACCGATAATTATAATGTAATGGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGG
645 ACCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGG
*
60358 T-AAAATTACCGAAAATATCATTATTTTAACAAAA-CGGTAAAACGCTATTGATTTTATTATTTT
710 TAAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTT
60421 TTACCG
775 TTACCG
* *
60427 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAATCATTAATGTTTTAGGCAGAAATA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAA-CATTGATGTTTTAGGTAGAAATA
*
60492 ATAATGTTTTAGATAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
60557 ACTTTTTAATGATAAAATTAGTAAACACAAATTATAC-AATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
*
60621 GTTGCCACAATATAAATAATGGAAAAAAAGGACACGG------TATTTCGATATTAGCTTTCTAA
195 GTTGCCACAATATAACTAAT-GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
60680 TAAATAAAAAAATTATATATAATTACAATATAA--TTAAAAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
60743 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
* *
60808 TATAAT-ATATTAATTTAAAATATTAGAATATTTTATTTAATATTATTTATATCAATATTATTAT
387 -ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
*
60872 TAAAATATTATATCTATAATTTTATTAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
451 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
60937 TATTATAAATTATATTTATTA-TTATTAT-ATAAAAATAATATATCATTAATTATATTATAATGA
516 TATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGA
61000 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
581 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
* *
61065 CCGATAATTATAATGT-A-AGATATATTTACAATGTAACTGGTATACAACAATAAC-AAA-CTGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
61126 AAAAATTACCGAAAATATCATTA-TTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTT
*
61190 TTACCC
775 TTACCG
61196 GTTTTGTTATTGTTGGGC-TTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
61260 TAATG-TTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAAC-AAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
61323 CTTTTT-ATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
61387 TTGCCACAATATAACTAATGACAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAATG--AAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
*
61452 TAAATAAAAAAATTATATATAATTAC-ATATAA-TTTAACAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
61515 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
61580 ATAATAATATTA-TTTAAAATATTAGAATAATTTATTTAATATTA-TT-TATC-ATA-TATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
61640 -AAA-A-TATATCTATAATTTTATAAAT-AAAA-T-TGATTA-TATATTTTGTTAAAATAAAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
61698 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
61763 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
* *
61828 CGATAATTATAATATAGTAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
61893 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAATTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATT-ATTTTT
61958 TACCG
776 TACCG
* *
61963 GTTTTGTTATTGTTGGGCATTTTACCAGAAATTTTAAAAAACATTGATGTTTTATGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
* *
62028 TAATATTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAACAACAAATA-CGGTAAAAATAG
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAA-ACCGGTAAAAATAG
62092 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
*
62157 GTTGCTACAATATAACTAATGAGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTA
195 GTTGCCACAATATAACTAAT--GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTA
*
62222 ATAAATAAAAAATTATATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAA
258 ATAAAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
62287 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
*
62352 ATAATAATATTA-TTTAAAATATTAGAATAATTTATTTAATATTACTTATATCAATATTATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
* * *
62416 AAAATATTATATCTATAATTTTATAAATTAAAATTATGATTATTATATTTTATTAAAATATAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
*
62481 ATTATAAATTATATTTATTATTTATTATAATAAAAATATTATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
62546 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
*
62611 CGATAATTAT-AT-T-ATAG-TATATTTACAATGTAACCGGTATACAAC-ATAACAAAACCTGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
62671 AAAATTACCG-AAATATCATTATTTTAACAAAACCCGGTAAAACGCTACTGATTTTATTAATTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAA-CCGGTAAAACGCTACTGATTTTATT-ATTTT
*
62735 TTACTG
775 TTACCG
* * *
62741 GTTTTGTTATTGTTGGGCATTTTACCAAAAATTTTAAAAAACATTGATGTTTTATGTAG-AAT-A
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
62804 TAATATTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAA-CGGT-AAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
62867 CTTTTTAATGATAAAATTAGT-AACACAAATTATACAAATTAATTTTAA-TTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
62930 TTGCCACAATAT-ACTAATG-AAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAAT-
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
62992 AATAAAAA-TATATATAATTACAATATAATTTT-AAAAAAATCATAATGAAGTGTGATGAAAACT
261 AATAAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAA--GTGATGAAAACT
*
63055 ACTCATAATTGCAATATAACTATAAACATCAAATATAATAAAATAAT-TTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
63119 AAT-ATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATT-TTTA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
*
63182 AATA-TAT-T-TATAATTTTATAAATACAAATTATGATTATTATATTTTGTT-AAATAAAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
63243 TATAAATTATATTTATTATTTATTATAAT-AAAAT-A-ATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
*
63305 AATAGTTAAACATATGTTTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
* *
63370 ATAATTATAATATAGTAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
63435 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTTA
714 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTTTTA
63500 CCG
778 CCG
* * * *
63503 GTTTTGTTATTGTTGGGCATTTTACCAGAAATTTTTAAAAATATTGATGTTTTATGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
63568 TAATATTTTAGGTAA-TTTTACC-GTTTTGTTATGCCCAACAATAAC-AAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
63630 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAA-TTTTTAG-TTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
* * *
63693 TTACCACAATATAACTAATGAAAAAAAGGACACTGTGTTTCTATTTCGATATTAGCTTTCTAAT-
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
63757 AATAAAAA-TATTATATAATTACAATATAATTTT-AAAAAAATCATAATGAAGTGATG-AAACTA
261 AATAAAAATTA-TATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
63819 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
* *
63884 ATAATATTATTTTAAAATATAAGAATAATTTATTTAATA-TATTTATATCAATATTATT-TTTAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
* *
63947 ATATTATATTTATAATTTTAT-AAT--ACATTATGATTATTATATTTTGTTAAAAT-AAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
64008 ATAAATTATATTTATTATTTATTATAATAAAAAT-A-ATATCATTAA-T-TATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
*
64069 ATAG-TAAACATA--TGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACTGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
*
64131 TAATTATAATGTAATGGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT-AAA
64196 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTTA
714 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTTA
64261 CC-
778 CCG
* * *
64263 GTTTTGTTATTGTTGGGCA--TTACTAG-AATGTTAAAAAGCATTGATGTTTTA-GTAAAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
64324 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGTCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
*
64389 CTTTTTAATTATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
64454 TTGCTACAATATAACTAATGAGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAAT--GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
*
64519 TAAATAAAAAAATTATATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
64584 CTACTCATAATTGCAATATAACTAT-AACATCAAATACAATAAAATAATATTATTTATTAAC-AA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
*
64647 A-AATAATATTA-TTTAAAATATTAGAA-AATTTATTTAATATTACTTATATC-ATA-TATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
* *
64707 -AAA-A-TATATCTATAA-TTTATAAATAAAAATTATGATTATTATATTTTATT-AAATATAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
64767 ATTAT-AATTAT-TTTA-T-TTTATTATAATAAAAAT-ATATATCATT-ATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
64826 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
64891 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
64956 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTTT
65021 TACCG
776 TACCG
* *
65026 GTTTTGTTATTGTTGGGCATTTTACCAGAAATTTTAAAAAACATTGATGTTTTATGTAG-AATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
65090 TAAT-TTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
65154 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
65219 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
65284 AATAAAAATATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATG-AAACT
261 AAT-AAAA-ATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
*
65348 ACTCATAATTGCAATATAACTATAAACATC-AATATAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
65412 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
* *
65477 AATATTATATTTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAATAAAA-TAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
65541 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
65606 AATAGTTAAACATA--TGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
* *
65669 ATAATTATAATATAGTAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
65734 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTTA
714 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTTTTA
65799 CCG
778 CCG
65802 GTTTTGTTATTGTTGGGCATTTTACCAGAAAT-TTAAAAAACATTGATG-TTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
65865 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
65930 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
65995 TTGCCACAATATAACTAATGAAAAAAAGGACACGG------TGTTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
66054 AATAAAAATATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
261 AAT-AAAA-ATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
66119 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
66184 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
* *
66249 AATATTATATTTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
66314 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
66379 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
66444 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT--A
66509 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTT
66574 TACC-
776 TACCG
* * *
66578 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAGCATTGATGTTTTAGGTAAAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
66643 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGTCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
* *
66708 CTTTTTAATGATAAAATTAATAAACACAAATTGTACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
* *
66773 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTCCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
66838 AATAAATAAAATTATATATAATAACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
261 AAT--A-AAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
66903 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
323 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
66968 TAATAATATT-TTTTAAAATATTAGAAT-ATTTATTTAATATTATTTATATCAATATTATTATTA
388 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTA
67031 AAATATTATATCTATAATTTTAT-AAT-AAAATTATGATTATTATATTTTGTTAAAATAAAATTA
453 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTA
*
67094 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATTATTAATTATATTATAATGAGA
518 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
67159 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
583 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
67224 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
648 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
67289 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTTTA
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTA
67353 CCG
778 CCG
67356 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAG-AATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
67420 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
67485 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
67550 TTGCCACAATATAACTAATGAAAAAAAGGACACGGT-TTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
67614 AAT-AAAATTATATATAATAACAATATAATTTTAAAAAAAAATCATAATGAAGTGATGAAAACTA
261 AATAAAAATTATATATAATTACAATATAATTTT-AAAAAAAATCATAATGAAGTGATGAAAACTA
67678 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
*
67743 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
67808 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
67873 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
67938 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
*
68003 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAA-CTGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
*
68067 ATTACCGAAAATATCATTATTTTAACAAAACCGATAAAACGCTACTGATTTTATTACCTTTTTTA
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA--TTTTTTA
68132 CCG
778 CCG
68135 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTT-AAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
68199 TAATGTTTTAGGTAA-TTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
68263 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
68328 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
68393 AATAAAAAAATTATATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAACT
261 AAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
68458 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
68523 -ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATC-ATATTATTTTTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
68586 AATATTATATCTATAATTTTATAAAT-AAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
68650 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
68715 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
68780 ATAA-T-T-A--TAAT-G-TATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT-AA
68838 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTT
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTT
68903 ACC-
777 ACCG
*
68906 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAACATTGATGTTTTAGGTA-AAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
68970 T-AT-TTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
69033 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
69098 TTGCCACAATATAACTAATGAAAAAAAGGACACGG------TGTTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
69157 AATAAAAATATTATATATAATTACAATATAATTTTTAAAAAAATCATAATGAAGTGATGAAAACT
261 AAT-AAAA-ATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
69222 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
69287 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
69352 AATATTATATCTATAATTTTATAAAT-AAAATTATGATTA-T-TATTTTGTTAAAAT-AAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
69413 TATAAATTATATTTATTA--T-TTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
69475 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
69540 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT--A
69605 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTT
69670 TACC-
776 TACCG
* * *
69674 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAGCATTGATGTTTTAGGTAAAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
69739 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
69804 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
69869 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAAT-
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
69933 AATAAAAAATTATATATAA-TACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAACCTA
261 AAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
69997 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
*
70062 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
* *
70127 ATATTATATTTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAAT-AAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
70191 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
70256 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
70321 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
70386 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTTAC
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTTAC
70451 C-
779 CG
* * *
70452 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAGCATTGATGTTTTAGGTAAAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
70517 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAAC-AAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
70581 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
70646 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
70711 AATAAAAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
261 AAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
70776 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
70841 AATAATATTA-TTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
70905 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
70970 TATAAATTATATTTATTATTTATTATAAT--AAA-AATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
71032 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
71097 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
71162 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTAC
714 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTAC
71227 CG
779 CG
71229 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
71294 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
71359 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
71424 TTGCCACAATATAACTAATGAAAAAAAGGACACGG------TGTTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
71483 AATAAAAATATTATATATAATTACAATATAATTTT-AAAAAAATCATAATGAAGTGATGAAAACT
261 AAT-AAAA-ATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
71547 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
71612 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
* *
71677 AATATTATATTTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
71742 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
71807 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
71872 ATAATTATAATGTAATAG--ATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
71935 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTAC
714 AATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTAC
72000 CG
779 CG
72002 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
72067 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
72132 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
72197 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
72262 AATAAAAAATTATATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAACTA
261 AAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
72327 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
72392 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
72457 ATATTATATCTATAATTTTAT-AATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
*
72521 ATAAATTATAATTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
72586 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
72651 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
72716 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTTAC
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTTAC
72781 C-
779 CG
* * *
72782 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAGCATTGATGTTTTAGGTAAAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
72847 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
72912 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
72977 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTA-TTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
73041 AATAAAAAATTATATATAATTACAATATAATTTT-AAAAAAATCATAATGAAGTGATG-AAACTA
261 AAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
73104 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAAT-AT-TTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
73167 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
73232 ATATTATATCTATAATTTTATAAAT-AAAATTATGATTATTATATTTTGTTAAAAT-AAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
73295 ATAAATTATATTTATTATTTATTATAAT---AA-AATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
73356 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
73421 TAATTATAATGTAAT-GATATA-TTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
73484 ATTACCGAAAATATCATTATTTTAACAAAACC-GTAAAACGCTACTGATTTTATTATTTTTTACC
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTACC
73548 G
780 G
* * *
73549 GTTTTGTTATTGTTGGGCATTTTA-CTGGAATGTTAAAAAACCATTGATGTTTCAGGTAGAAATA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAA-CATTGATGTTTTAGGTAGAAATA
73613 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
73678 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
*
73743 GTTGCCACAATATAACTAATGAAAAAAAGGACAC-GTTTTTCTATTTCGATATTAGCTTTCTAAT
195 GTTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
*
73807 AAATAAAAAAATTATATATAATTACAATATAATTTTAAAAAAAAAAGCATAATGAAGTGATGAAA
260 AAAT--AAAAATTATATATAATTACAATATAATTTT--AAAAAAAATCATAATGAAGTGATGAAA
73872 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTA-TTATTAACAA
321 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
73936 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATC-A-A-TATTAT
386 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
73998 TAAAATATTATATCTATAATTTTATAAAT-AAAATTATGATTATTATA-TTTGTTAAAATAAAAT
451 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
74061 TATTATAAATTATATTTATTATTTATTATAAT-AAAATAATATATCATTAATTATATTATAATGA
516 TATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGA
74125 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
581 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
*
74190 CCGATAATTATAATGTAATAGATATA-TTACAATGTAACCGGTATACAACAATAACAAAA-CTGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
74253 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTT
74318 TACCG
776 TACCG
*
74323 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAGTAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
74388 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
74453 CTTTTTAATGATAAAATTAGTAAACAC-AATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
74517 TTGCCACAATATAACTAATGACAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAATG--AAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
74582 TAAATAAAAAAATTATATATAATTACAATATAATTTTAAAAAAAAATCATAATGAAGTGATGAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTT-AAAAAAAATCATAATGAAGTGATGAAA
74647 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
321 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
74712 AATAATAATATTATTTTAAAATATTAGAATAATTTATTT-A-A-TATTTATATCAATATTATTAT
386 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
74774 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
451 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
74839 TATTATAAATTATATTTATTA-TTA-TATAA-AAAAATAATATATCATTAATTATATTATAATGA
516 TATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGA
74901 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
581 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
74966 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
75031 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAATTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATT-ATTTT
75096 TTACCG
775 TTACCG
75102 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
75167 TAAAGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACC-GTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
75231 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
75296 TTGCCACAATATAA-TAATGAAAAAAAAGGACACGGT-GTTCTATTTCGATATTAGCTTTCTAAT
196 TTGCCACAATATAACTAATG-AAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
75359 AAATAAAAAATTATATATAATTACAATATAATTTT-AAAAAAATCATAATGAAGTGATGAAAACT
260 AAAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACT
75423 ACTCATAATTGCAATATAACTAT-AACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
324 ACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAAT
*
75487 AATAATATTATTTTAAAATATTAAAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
389 AATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAA
75552 AATA-TATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAAT-AAATTAT
454 AATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTAT
75615 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
519 TATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAG
75680 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
584 AATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCG
75745 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAA
649 ATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT-AA
75810 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTT
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTT
75875 ACC-
777 ACCG
*
75878 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
75943 TAATGTTTTAGGTAATTTTTACCGGTTTT-TTATGCCCAACAATAATAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
*
76007 CTTTTTAATGATAAAATTAGTAAACATAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
76072 TTGCCACAATATAACTAATG-AAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
*
76136 AATAAATAAAATTATATATAATCACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
261 AAT--A-AAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
76201 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
323 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
*
76266 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTA
388 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTA
* *
76331 AAATATTATATTTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAATAAAATTA
453 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTA
76396 TTATAAATTATATTTATTATTTATTATAAT--AAA-AATATATCATTAATTATATTATAATGAGA
518 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
76458 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
583 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
76523 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAA-AAAACCGGTAA
648 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
76587 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTT
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA--TTTTT
76652 TACCG
776 TACCG
76657 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
76722 TAAAGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
76787 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
76852 TTGCCACAATATAACTAATGAAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
196 TTGCCACAATATAACTAATG-AAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
*
76917 AAATAAAAAAATTATATATAATTACAATATAATTTAAAAAAAAATCATAATGAAGTGATGAAAAC
260 AAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
76982 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
323 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
*
77047 TAATAATATTATTTAAAAATATTAGAATAA-TTATTTAATATTATTTATATCAATATTATTATTA
388 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTA
77111 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTA
453 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTA
77176 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
518 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
77241 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
583 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
77306 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
648 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT-A
*
77371 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTTTTATGTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTT
77436 TACCG
776 TACCG
* *
77441 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAACATTGATGTTTTAGGTATAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
* * * *
77506 TAGTGTGTTAGGTAATTTTTATCGGTTTTTTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
*
77571 CTTTTTATTGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
77636 TTGCCACAATATAACTAATTAGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAA-T-GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
*
77701 TAAATAAAAAATTATATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAAC
259 TAAAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAAC
77766 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
323 TACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAA
77831 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTA
388 TAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTA
77896 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTA-T-TA-TTT-TT-AAAT--AATTA
453 AAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTA
77954 TTATAAATTATA-TTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
518 TTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGA
78018 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
583 GAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACC
*
78083 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGATAA
648 GATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAA
78148 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATGTTTTT
713 AAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTTT
*
78213 ATC-
777 ACCG
78216 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
* * **
78281 TAAAGTTTTAGGTAATATTTACCGGTTTTGTTATGCCCAACAATAACAAAACTTGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
78346 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
78411 TTGCCACAATATAACTAATGAGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAAT--GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
* *
78476 TAAATAAAAAAATTTTATATAATTACAATATAATTTTAACAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
78541 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
78606 ATAATAATATTA-TTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
* *
78670 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTATTAAAATATAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
78735 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
* ** *
78800 AGAATAGTTAAACAAATGTGTCGATATTTTTTTTTAAAAGTATCGACACATATGTTACATCGAAA
582 AGAATAGTTAAACATATGTGTCGATA-CATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
*
78865 CCGATAATTATAATATAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAA-CGGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
78929 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAATTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATT-ATTTT
78994 TTACCG
775 TTACCG
*
79000 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAAACATTGATGTTTTAGGTAGAAGTA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTT-AAAAAACATTGATGTTTTAGGTAGAAATA
*
79065 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAATCCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
79130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
*
79195 CTTGCCACAATATAACTAATGGAAAAAAAGGACACGG------TATTTCGATATTAGCTTTCTAA
195 GTTGCCACAATATAACTAAT-GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
*
79254 TAAATAAAAAAATTATATATAATTACAATATAA-TTAAAAAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
79318 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
79383 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
*
79448 AAAATATTATATCTATAATTTTATAAATAAAAATTGTGATTATTATATTTTGTTAAAATAAAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
*
79513 ATTATAAATTATATTTATTATTTATTAGAAT--AAA-AATATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
79575 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
79640 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
*
79705 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTTTTATGTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTAT-TTTT
79770 TACCG
776 TACCG
* *
79775 G-TTTGTTATTGTTGGGCATTTTACTAG-AATGTTAAAAAAACATTGATGTTTTAGGTATAAATA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTT-AAAAAACATTGATGTTTTAGGTAGAAATA
* * * *
79838 ATAGTGTGTTAGGTAATTTTTATCGGTTTTTTTATGCCCAACAATAACAAAACCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
* * **
79903 ACTTTTTATTGATAAAATTAGTAAACATAAATTATACAAATTAATTAAAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
* * *
79968 -TTTCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTTTATTTCGATATTAGCTTTCTAAT
195 GTTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
* *
80032 AAATAAAAAAT-TATATAATCACAATAT--TTTTAAAAAAAATCATAATGAAGTGATGAAAA-TA
260 AAATAAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
80093 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
*
80158 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTTTTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
*
80223 ATATTATATCTATAATTTTATAAATACAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
80288 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
80353 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
80418 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACC-GTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
80482 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTACC
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTACC
80547 G
780 G
*
80548 ATTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAATCATTGATGTTTTAGGTAGAAATA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAA-CATTGATGTTTTAGGTAGAAATA
*
80613 ATAATGTTTTAGATAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
65 ATAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAG
80678 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
130 ACTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
*
80743 GTTGCCACAATATAAATAATGGAAAAAAAGGACACGG------TATTTCGATATTAGCTTTCTAA
195 GTTGCCACAATATAACTAAT-GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
80802 TAAATAAAAAAATTATATATAATTACAATATAA-TTTAAAAAAAATCATAATGAAGTGATGAAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAA
80866 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
*
80931 ATAATAATATTATTTTAAAATATTAGAATATTTTATTTAATATTATTTATATC-A-A-TATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
80993 AAAATATTATATCT-TAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
*
81057 ATTATAAATTATAATTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
*
81122 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGAGACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
81187 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT-
81252 AAAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTT
711 -AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTT
81317 TTACCG
775 TTACCG
*
81323 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
*
81388 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGTCCAACAATAAC-AAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
81452 CTTTTTAATGATAAAATTAGTAAACACAAA-T-TACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
81515 TTGCCACAATATAACTAATGAGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
196 TTGCCACAATATAACTAAT--GAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAA
81580 TAAATAAAAAAATTATATATAATTACAATATAATTTTAAAAAAAAATCATAATGAAGTGATGAAA
259 TAAAT--AAAAATTATATATAATTACAATATAATTTT-AAAAAAAATCATAATGAAGTGATGAAA
*
81645 CCTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
321 ACTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAA
81710 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
386 AATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTAT
81775 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
451 TAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAAT
81840 TATTATAAATTATATTTATTATTTATTATAAT--AAA-AATATATCATTAATTATATTATAATGA
516 TATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGA
81902 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
581 GAGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAA
81967 CCGATAATTATAATGTAATAGATATA-TTACAATGTAACCGGTATACAACAATAACAAAACCGGT
646 CCGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGT
82031 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTT
711 AAAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTT
82096 TACCG
776 TACCG
*
82101 GTTTTGTTATTGTTGGGCATTTTACTAGAAATGTT-AAAAACATTGATGTTTTAGGTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
82165 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
82230 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
131 CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
*
82295 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTGTTTCTATTTCGATATTAGCTTTCTAATA
196 TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
82360 AATAAAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
261 AAT-AAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTA
82425 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
325 CTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATA
82490 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
390 ATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAA
82555 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
455 ATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATT
82620 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
520 ATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGA
82685 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
585 ATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGA
*
82750 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAA-CTGTAAAA
650 TAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAA
*
82814 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTTAA
715 ATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTA-TTTTTTAC
82879 CG
779 CG
82881 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTT-AAAAACATTGATGTTTTA-GTAGAAATAA
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
82944 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACC-GTAAAAATAGA
66 TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
83008 CTTTTTGAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
131 CTTTTT-AATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAA
83073 GTTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
195 GTTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAAT
*
83138 AAATAAAAAAATTATATATAATTACAATATAATTTTTTAAAAAAATCATAATGAAGTGATGAAAA
260 AAAT--AAAAATTATATATAATTACAATATAA-TTTTAAAAAAAATCATAATGAAGTGATGAAAA
83203 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
322 CTACTCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAA
*
83268 ATAATAATATTATTTGAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
387 ATAATAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATT
83333 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
452 AAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATT
*
83398 ATTATAAATTATATTTTTTATTTATTATAATAAAAAT-A-ATATCATTAATTATATTATAATGAG
517 ATTATAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAG
83461 AGAATAGTTAAACATATGTGTCGATACATTTTCT-AAAGTATCGACACATATGTTACATCGAAAC
582 AGAATAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAAC
*
83525 CGATAATTATAATATAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
647 CGATAATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTA
83590 AAAATTA-CGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGA-TTTATTAATTTTT
712 AAAATTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATT-ATTTTT
83653 TACCG
776 TACCG
*
83658 GTTTTGTTATTGTT-GGCATTTTACTAGAAATGTT-AAAAACATTGATGTTTTA-GTAGAAAT-A
1 GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
83719 TAAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACA
66 T-AATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACA
83762 TCGAAACCGA
Statistics
Matches: 24850, Mismatches: 450, Indels: 762
0.95 0.02 0.03
Matches are distributed among these distances:
756 23 0.00
757 127 0.01
758 49 0.00
759 86 0.00
760 366 0.01
761 196 0.01
762 434 0.02
763 590 0.02
764 559 0.02
765 504 0.02
766 375 0.02
767 525 0.02
768 456 0.02
769 145 0.01
770 485 0.02
771 891 0.04
772 1494 0.06
773 1336 0.05
774 924 0.04
775 1766 0.07
776 1964 0.08
777 1788 0.07
778 2081 0.08
779 1556 0.06
780 1453 0.06
781 917 0.04
782 499 0.02
783 640 0.03
784 1006 0.04
785 835 0.03
786 19 0.00
787 111 0.00
788 393 0.02
789 138 0.01
790 110 0.00
791 9 0.00
ACGTcount: A:0.44, C:0.09, G:0.09, T:0.38
Consensus pattern (780 bp):
GTTTTGTTATTGTTGGGCATTTTACCAGAAATGTTAAAAAACATTGATGTTTTAGGTAGAAATAA
TAATGTTTTAGGTAATTTTTACCGGTTTTGTTATGCCCAACAATAACAAAACCGGTAAAAATAGA
CTTTTTAATGATAAAATTAGTAAACACAAATTATACAAATTAATTTTAATTTTTTAGTTTGTAAG
TTGCCACAATATAACTAATGAAAAAAAGGACACGGTATTTCTATTTCGATATTAGCTTTCTAATA
AATAAAAATTATATATAATTACAATATAATTTTAAAAAAAATCATAATGAAGTGATGAAAACTAC
TCATAATTGCAATATAACTATAAACATCAAATACAATAAAATAATATTATTTATTAACAAAATAA
TAATATTATTTTAAAATATTAGAATAATTTATTTAATATTATTTATATCAATATTATTATTAAAA
TATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTGTTAAAATAAAATTATTA
TAAATTATATTTATTATTTATTATAATAAAAATAATATATCATTAATTATATTATAATGAGAGAA
TAGTTAAACATATGTGTCGATACATTTTCTAAAAGTATCGACACATATGTTACATCGAAACCGAT
AATTATAATGTAATAGATATATTTACAATGTAACCGGTATACAACAATAACAAAACCGGTAAAAA
TTACCGAAAATATCATTATTTTAACAAAACCGGTAAAACGCTACTGATTTTATTATTTTTTACCG
Found at i:68569 original size:14 final size:14
Alignment explanation
Indices: 68550--68607 Score: 53
Period size: 14 Copynumber: 4.1 Consensus size: 14
68540 TATTAGAATA
*
68550 ATTTATTTAATATT
1 ATTTATATAATATT
*
68564 ATTTATATCATATT
1 ATTTATATAATATT
* *
68578 ATTTTTAAAATATT
1 ATTTATATAATATT
* * *
68592 ATATCTATAATTTT
1 ATTTATATAATATT
68606 AT
1 AT
68608 AAATAAAATT
Statistics
Matches: 35, Mismatches: 9, Indels: 0
0.80 0.20 0.00
Matches are distributed among these distances:
14 35 1.00
ACGTcount: A:0.38, C:0.03, G:0.00, T:0.59
Consensus pattern (14 bp):
ATTTATATAATATT
Found at i:70131 original size:14 final size:15
Alignment explanation
Indices: 70097--70141 Score: 56
Period size: 15 Copynumber: 3.1 Consensus size: 15
70087 TAATTTATTT
* *
70097 AATATTATTTATATC
1 AATATTATTTTTATA
70112 AATATTATTTTTA-A
1 AATATTATTTTTATA
*
70126 AATATTATATTTATA
1 AATATTATTTTTATA
70141 A
1 A
70142 TTTTATAAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
14 12 0.46
15 14 0.54
ACGTcount: A:0.44, C:0.02, G:0.00, T:0.53
Consensus pattern (15 bp):
AATATTATTTTTATA
Found at i:70879 original size:20 final size:22
Alignment explanation
Indices: 70841--70882 Score: 61
Period size: 20 Copynumber: 2.0 Consensus size: 22
70831 TTAACAAAAT
70841 AATAATATTATTTAAAATATTAG
1 AATAATATTATTT-AAATATTAG
70864 AATAAT-TTATTT-AATATTA
1 AATAATATTATTTAAATATTA
70883 TTTATATCAA
Statistics
Matches: 19, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
20 7 0.37
22 6 0.32
23 6 0.32
ACGTcount: A:0.50, C:0.00, G:0.02, T:0.48
Consensus pattern (22 bp):
AATAATATTATTTAAATATTAG
Found at i:71682 original size:14 final size:15
Alignment explanation
Indices: 71648--71692 Score: 56
Period size: 15 Copynumber: 3.1 Consensus size: 15
71638 TAATTTATTT
* *
71648 AATATTATTTATATC
1 AATATTATTTTTATA
71663 AATATTATTTTTA-A
1 AATATTATTTTTATA
*
71677 AATATTATATTTATA
1 AATATTATTTTTATA
71692 A
1 A
71693 TTTTATAAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
14 12 0.46
15 14 0.54
ACGTcount: A:0.44, C:0.02, G:0.00, T:0.53
Consensus pattern (15 bp):
AATATTATTTTTATA
Found at i:72533 original size:16 final size:16
Alignment explanation
Indices: 72514--72548 Score: 52
Period size: 16 Copynumber: 2.2 Consensus size: 16
72504 GTTAAAATAA
72514 AATTATTATAAATTAT
1 AATTATTATAAATTAT
**
72530 AATTATTATTTATTAT
1 AATTATTATAAATTAT
72546 AAT
1 AAT
72549 AAAAATAATA
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.46, C:0.00, G:0.00, T:0.54
Consensus pattern (16 bp):
AATTATTATAAATTAT
Found at i:72570 original size:26 final size:26
Alignment explanation
Indices: 72514--72572 Score: 66
Period size: 26 Copynumber: 2.3 Consensus size: 26
72504 GTTAAAATAA
* * *
72514 AATTATTATAAATTATAATTATTATT
1 AATTATAATAAATAATAATTATCATT
*
72540 TATTATAATAAA-AATAATATATCATT
1 AATTATAATAAATAATAAT-TATCATT
72566 AATTATA
1 AATTATA
72573 TTATAATGAG
Statistics
Matches: 27, Mismatches: 5, Indels: 2
0.79 0.15 0.06
Matches are distributed among these distances:
25 5 0.19
26 22 0.81
ACGTcount: A:0.51, C:0.02, G:0.00, T:0.47
Consensus pattern (26 bp):
AATTATAATAAATAATAATTATCATT
Found at i:73318 original size:26 final size:25
Alignment explanation
Indices: 73289--73348 Score: 68
Period size: 26 Copynumber: 2.4 Consensus size: 25
73279 GTTAAAATAA
* * *
73289 ATTATTATAAATTATATTTATTATTT
1 ATTATTATAAAATATA-TCATTAATT
*
73315 ATTATAATAAAATATATCATTAATT
1 ATTATTATAAAATATATCATTAATT
73340 A-TATTATAA
1 ATTATTATAA
73349 TGAGAGAATA
Statistics
Matches: 29, Mismatches: 5, Indels: 2
0.81 0.14 0.06
Matches are distributed among these distances:
24 7 0.24
25 8 0.28
26 14 0.48
ACGTcount: A:0.47, C:0.02, G:0.00, T:0.52
Consensus pattern (25 bp):
ATTATTATAAAATATATCATTAATT
Found at i:73449 original size:18 final size:17
Alignment explanation
Indices: 73419--73452 Score: 50
Period size: 18 Copynumber: 1.9 Consensus size: 17
73409 CATCGAAACC
*
73419 GATAATTATAATGTAAT
1 GATAATTACAATGTAAT
73436 GATATATTACAATGTAA
1 GATA-ATTACAATGTAA
73453 CCGGTATACA
Statistics
Matches: 15, Mismatches: 1, Indels: 1
0.88 0.06 0.06
Matches are distributed among these distances:
17 4 0.27
18 11 0.73
ACGTcount: A:0.47, C:0.03, G:0.12, T:0.38
Consensus pattern (17 bp):
GATAATTACAATGTAAT
Found at i:74742 original size:24 final size:23
Alignment explanation
Indices: 74690--74783 Score: 72
Period size: 24 Copynumber: 4.0 Consensus size: 23
74680 AAATACAATA
*
74690 AAATAATATTATTTATTAACAA-AAT
1 AAATAATATTA-TT-TTAA-AATATT
74715 -AATAATATTATTTTAAAATATT
1 AAATAATATTATTTTAAAATATT
*
74737 AGAATAAT-TTA-TTTAATAT-TT
1 A-AATAATATTATTTTAAAATATT
*
74758 ATATCAATATTATTATTAAAATATT
1 AAAT-AATATTATT-TTAAAATATT
74783 A
1 A
74784 TATCTATAAT
Statistics
Matches: 57, Mismatches: 4, Indels: 16
0.74 0.05 0.21
Matches are distributed among these distances:
20 2 0.04
21 8 0.14
22 16 0.28
23 6 0.11
24 22 0.39
25 3 0.05
ACGTcount: A:0.50, C:0.02, G:0.01, T:0.47
Consensus pattern (23 bp):
AAATAATATTATTTTAAAATATT
Found at i:75594 original size:22 final size:23
Alignment explanation
Indices: 75544--75595 Score: 56
Period size: 22 Copynumber: 2.4 Consensus size: 23
75534 TATCAATATT
* *
75544 ATTATTA-AAATATATATCTATA
1 ATTATTATAAATAAAAATCTATA
*
75566 ATT-TTATAAATAAAAAT-TATG
1 ATTATTATAAATAAAAATCTATA
75587 ATTATTATA
1 ATTATTATA
75596 TTTTGTTAAA
Statistics
Matches: 25, Mismatches: 3, Indels: 4
0.78 0.09 0.12
Matches are distributed among these distances:
21 9 0.36
22 16 0.64
ACGTcount: A:0.50, C:0.02, G:0.02, T:0.46
Consensus pattern (23 bp):
ATTATTATAAATAAAAATCTATA
Found at i:76337 original size:14 final size:15
Alignment explanation
Indices: 76303--76347 Score: 56
Period size: 15 Copynumber: 3.1 Consensus size: 15
76293 TAATTTATTT
* *
76303 AATATTATTTATATC
1 AATATTATTTTTATA
76318 AATATTATTTTTA-A
1 AATATTATTTTTATA
*
76332 AATATTATATTTATA
1 AATATTATTTTTATA
76347 A
1 A
76348 TTTTATAAAT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
14 12 0.46
15 14 0.54
ACGTcount: A:0.44, C:0.02, G:0.00, T:0.53
Consensus pattern (15 bp):
AATATTATTTTTATA
Found at i:77062 original size:21 final size:20
Alignment explanation
Indices: 77022--77084 Score: 56
Period size: 21 Copynumber: 3.0 Consensus size: 20
77012 CAAATACAAT
*
77022 AAAATAATATTATT-TATTAA
1 AAAATAATAATATTAT-TTAA
77042 CAAAATAATAATATTATTTAA
1 -AAAATAATAATATTATTTAA
* *
77063 AAATATTAGAATAATTATTTAA
1 AAA-ATAATAAT-ATTATTTAA
77085 TATTATTTAT
Statistics
Matches: 36, Mismatches: 3, Indels: 5
0.82 0.07 0.11
Matches are distributed among these distances:
20 3 0.08
21 23 0.64
22 10 0.28
ACGTcount: A:0.56, C:0.02, G:0.02, T:0.41
Consensus pattern (20 bp):
AAAATAATAATATTATTTAA
Found at i:77956 original size:26 final size:27
Alignment explanation
Indices: 77896--77958 Score: 76
Period size: 27 Copynumber: 2.4 Consensus size: 27
77886 ATTATTATTA
77896 AAATATTATATCTATAATTTTATAAAT
1 AAATATTATATCTATAATTTTATAAAT
* *
77923 AAAAATTATGAT-TATTATTTT-TAAAT
1 AAATATTAT-ATCTATAATTTTATAAAT
*
77949 AATTATTATA
1 AAATATTATA
77959 AATTATATTA
Statistics
Matches: 31, Mismatches: 4, Indels: 4
0.79 0.10 0.10
Matches are distributed among these distances:
25 1 0.03
26 12 0.39
27 16 0.52
28 2 0.06
ACGTcount: A:0.48, C:0.02, G:0.02, T:0.49
Consensus pattern (27 bp):
AAATATTATATCTATAATTTTATAAAT
Found at i:77978 original size:15 final size:16
Alignment explanation
Indices: 77927--77982 Score: 53
Period size: 15 Copynumber: 3.5 Consensus size: 16
77917 ATAAATAAAA
*
77927 ATTATGATTATTATTT
1 ATTATAATTATTATTT
**
77943 -TTAAATAATTATTATAA
1 ATT--ATAATTATTATTT
77960 ATTAT-ATTATTATTT
1 ATTATAATTATTATTT
77975 ATTATAAT
1 ATTATAAT
77983 AAAAATAATA
Statistics
Matches: 31, Mismatches: 5, Indels: 8
0.70 0.11 0.18
Matches are distributed among these distances:
15 15 0.48
16 4 0.13
17 10 0.32
18 2 0.06
ACGTcount: A:0.41, C:0.00, G:0.02, T:0.57
Consensus pattern (16 bp):
ATTATAATTATTATTT
Found at i:78646 original size:20 final size:22
Alignment explanation
Indices: 78608--78649 Score: 61
Period size: 20 Copynumber: 2.0 Consensus size: 22
78598 TTAACAAAAT
78608 AATAATATTATTTAAAATATTAG
1 AATAATATTATTT-AAATATTAG
78631 AATAAT-TTATTT-AATATTA
1 AATAATATTATTTAAATATTA
78650 TTTATATCAA
Statistics
Matches: 19, Mismatches: 0, Indels: 3
0.86 0.00 0.14
Matches are distributed among these distances:
20 7 0.37
22 6 0.32
23 6 0.32
ACGTcount: A:0.50, C:0.00, G:0.02, T:0.48
Consensus pattern (22 bp):
AATAATATTATTTAAATATTAG
Found at i:78693 original size:25 final size:25
Alignment explanation
Indices: 78651--78730 Score: 67
Period size: 25 Copynumber: 3.0 Consensus size: 25
78641 TTAATATTAT
*
78651 TTATATCAAT-ATTATTATTAAAATA
1 TTATATCTATAATT-TTATTAAAATA
78676 TTATATCTATAATTTTATAAATAAAA-A
1 TTATATCTATAATTTTAT---TAAAATA
78703 TTATGAT-TATTATATTTTATTAAAATA
1 TTAT-ATCTA-TA-ATTTTATTAAAATA
78730 T
1 T
78731 AATTATTATA
Statistics
Matches: 46, Mismatches: 1, Indels: 14
0.75 0.02 0.23
Matches are distributed among these distances:
25 13 0.28
26 8 0.17
27 9 0.20
28 9 0.20
29 7 0.15
ACGTcount: A:0.46, C:0.03, G:0.01, T:0.50
Consensus pattern (25 bp):
TTATATCTATAATTTTATTAAAATA
Found at i:78736 original size:24 final size:24
Alignment explanation
Indices: 78659--78740 Score: 67
Period size: 24 Copynumber: 3.1 Consensus size: 24
78649 ATTTATATCA
*
78659 ATATTATTATTAAAATATTA-TATCT
1 ATATT-TTATTAAAATATAATTAT-T
*
78684 ATAATTTTATAAATAAAAATTATGATTATT
1 AT-ATTTTAT---T-AAAA-TATAATTATT
78714 ATATTTTATTAAAATATAATTATT
1 ATATTTTATTAAAATATAATTATT
78738 ATA
1 ATA
78741 AATTATATTT
Statistics
Matches: 48, Mismatches: 2, Indels: 15
0.74 0.03 0.23
Matches are distributed among these distances:
24 12 0.25
25 10 0.21
26 4 0.08
28 1 0.02
29 11 0.23
30 7 0.15
31 3 0.06
ACGTcount: A:0.48, C:0.01, G:0.01, T:0.50
Consensus pattern (24 bp):
ATATTTTATTAAAATATAATTATT
Found at i:78746 original size:24 final size:23
Alignment explanation
Indices: 78658--78743 Score: 63
Period size: 23 Copynumber: 3.8 Consensus size: 23
78648 TATTTATATC
*
78658 AATATTATTATTA-AAATATTATA
1 AATATAATTATTATAAATATTA-A
**
78681 TCTATAATT-TTATAAATA--AA
1 AATATAATTATTATAAATATTAA
* **
78701 AATTATGATTATTATATTTTATTAA
1 AA-TATAATTATTATA-AATATTAA
78726 AATATAATTATTATAAAT
1 AATATAATTATTATAAAT
78744 TATATTTATT
Statistics
Matches: 46, Mismatches: 11, Indels: 12
0.67 0.16 0.17
Matches are distributed among these distances:
20 1 0.02
21 7 0.15
22 8 0.17
23 14 0.30
24 12 0.26
25 4 0.09
ACGTcount: A:0.49, C:0.01, G:0.01, T:0.49
Consensus pattern (23 bp):
AATATAATTATTATAAATATTAA
Found at i:78747 original size:16 final size:16
Alignment explanation
Indices: 78683--78765 Score: 57
Period size: 16 Copynumber: 5.4 Consensus size: 16
78673 ATATTATATC
78683 TATAATT-TTATAAAT
1 TATAATTATTATAAAT
* * * *
78698 AAAAATTATGAT-TAT
1 TATAATTATTATAAAT
*
78713 TAT-ATT-TTATTAAAA
1 TATAATTATTA-TAAAT
78728 TATAATTATTATAAAT
1 TATAATTATTATAAAT
* **
78744 TATATTTATTATTTAT
1 TATAATTATTATAAAT
78760 TATAAT
1 TATAAT
78766 AAAAATAATA
Statistics
Matches: 49, Mismatches: 14, Indels: 9
0.68 0.19 0.12
Matches are distributed among these distances:
13 2 0.04
14 4 0.08
15 12 0.24
16 28 0.57
17 3 0.06
ACGTcount: A:0.46, C:0.00, G:0.01, T:0.53
Consensus pattern (16 bp):
TATAATTATTATAAAT
Found at i:78788 original size:42 final size:43
Alignment explanation
Indices: 78708--78791 Score: 109
Period size: 42 Copynumber: 2.0 Consensus size: 43
78698 AAAAATTATG
* * *
78708 ATTATTATATTTTATTAAAATATAATTATTATAAATTATATTT
1 ATTATTATATTATAATAAAATATAATTATCATAAATTATATTT
*
78751 ATTATT-TATTATAATAAAA-ATAATATATCATTAATTATATT
1 ATTATTATATTATAATAAAATATAAT-TATCATAAATTATATT
78792 ATAATGAGAG
Statistics
Matches: 36, Mismatches: 4, Indels: 3
0.84 0.09 0.07
Matches are distributed among these distances:
41 5 0.14
42 25 0.69
43 6 0.17
ACGTcount: A:0.46, C:0.01, G:0.00, T:0.52
Consensus pattern (43 bp):
ATTATTATATTATAATAAAATATAATTATCATAAATTATATTT
Found at i:78792 original size:68 final size:68
Alignment explanation
Indices: 78658--78792 Score: 152
Period size: 68 Copynumber: 2.0 Consensus size: 68
78648 TATTTATATC
* * *
78658 AATATTATTATTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATTATTATATTTTAT
1 AATATAATTATTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATCATTATATTATAT
78723 TAA
66 TAA
* * *
78726 AATATAATTATTATAA-ATTATATTTATTA-TTTATTATAATAAAAATAATAT-ATCATTA-ATT
1 AATATAATTATTAAAATATTATATCTATAATTTTA-TA-AATAAAAAT--TATGATCATTATATT
78787 ATATTA
62 ATATTA
78793 TAATGAGAGA
Statistics
Matches: 57, Mismatches: 6, Indels: 8
0.80 0.08 0.11
Matches are distributed among these distances:
66 4 0.07
67 13 0.23
68 31 0.54
69 6 0.11
70 3 0.05
ACGTcount: A:0.48, C:0.01, G:0.01, T:0.50
Consensus pattern (68 bp):
AATATAATTATTAAAATATTATATCTATAATTTTATAAATAAAAATTATGATCATTATATTATAT
TAA
Found at i:81072 original size:16 final size:16
Alignment explanation
Indices: 81053--81087 Score: 52
Period size: 16 Copynumber: 2.2 Consensus size: 16
81043 GTTAAAATAA
81053 AATTATTATAAATTAT
1 AATTATTATAAATTAT
**
81069 AATTATTATTTATTAT
1 AATTATTATAAATTAT
81085 AAT
1 AAT
81088 AAAAATAATA
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
16 17 1.00
ACGTcount: A:0.46, C:0.00, G:0.00, T:0.54
Consensus pattern (16 bp):
AATTATTATAAATTAT
Found at i:81109 original size:26 final size:26
Alignment explanation
Indices: 81053--81111 Score: 66
Period size: 26 Copynumber: 2.3 Consensus size: 26
81043 GTTAAAATAA
* * *
81053 AATTATTATAAATTATAATTATTATT
1 AATTATAATAAATAATAATTATCATT
*
81079 TATTATAATAAA-AATAATATATCATT
1 AATTATAATAAATAATAAT-TATCATT
81105 AATTATA
1 AATTATA
81112 TTATAATGAG
Statistics
Matches: 27, Mismatches: 5, Indels: 2
0.79 0.15 0.06
Matches are distributed among these distances:
25 5 0.19
26 22 0.81
ACGTcount: A:0.51, C:0.02, G:0.00, T:0.47
Consensus pattern (26 bp):
AATTATAATAAATAATAATTATCATT
Found at i:84142 original size:87 final size:87
Alignment explanation
Indices: 84044--84380 Score: 507
Period size: 87 Copynumber: 3.9 Consensus size: 87
84034 AAATAGGTCA
* *
84044 ATATAAACGCTACCTATTACATTATATAAGCGTTACCTAATATGTTATTGTACTTGATAATATTT
1 ATATAAGCGCTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATATTT
84109 TCGGTTAAATA-CTTATTTTATT
66 TCGGTTAAATATC-TATTTTATT
* *
84131 ATATAAGCGCTACCTATTACATTATATAAGTGATACCTAATATGTTATTGTACTTGATAATA-TT
1 ATATAAGCGCTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATATTT
84195 TCTGGTTAAATATCTATTTTATT
66 TC-GGTTAAATATCTATTTTATT
* * *
84218 ATTTAAGCGTTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATGTTT
1 ATATAAGCGCTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATATTT
* *
84283 CCGGTCAAATATCTATTTTATT
66 TCGGTTAAATATCTATTTTATT
* * * *
84305 ATATAAGCGATACCTAATACATTATATAAGCGCTACCTAATATGTTATTATACTTAATAATATTT
1 ATATAAGCGCTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATATTT
*
84370 TCCGATTAAAT
66 T-CGGTTAAAT
84381 GATATAACAT
Statistics
Matches: 227, Mismatches: 19, Indels: 7
0.90 0.08 0.03
Matches are distributed among these distances:
86 4 0.02
87 212 0.93
88 11 0.05
ACGTcount: A:0.34, C:0.13, G:0.10, T:0.43
Consensus pattern (87 bp):
ATATAAGCGCTACCTATTACATTATATAAGCGCTACCTAATATGTTATTGTACTTGATAATATTT
TCGGTTAAATATCTATTTTATT
Found at i:84178 original size:23 final size:23
Alignment explanation
Indices: 84128--84172 Score: 63
Period size: 23 Copynumber: 2.0 Consensus size: 23
84118 TACTTATTTT
* *
84128 ATTATATAAGCGCTACCTATTAC
1 ATTATATAAGCGATACCTAATAC
*
84151 ATTATATAAGTGATACCTAATA
1 ATTATATAAGCGATACCTAATA
84173 TGTTATTGTA
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
23 19 1.00
ACGTcount: A:0.40, C:0.16, G:0.09, T:0.36
Consensus pattern (23 bp):
ATTATATAAGCGATACCTAATAC
Found at i:84265 original size:23 final size:23
Alignment explanation
Indices: 84215--84259 Score: 63
Period size: 23 Copynumber: 2.0 Consensus size: 23
84205 TATCTATTTT
* * *
84215 ATTATTTAAGCGTTACCTATTAC
1 ATTATATAAGCGCTACCTAATAC
84238 ATTATATAAGCGCTACCTAATA
1 ATTATATAAGCGCTACCTAATA
84260 TGTTATTGTA
Statistics
Matches: 19, Mismatches: 3, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
23 19 1.00
ACGTcount: A:0.36, C:0.18, G:0.09, T:0.38
Consensus pattern (23 bp):
ATTATATAAGCGCTACCTAATAC
Found at i:84352 original size:23 final size:23
Alignment explanation
Indices: 84302--84346 Score: 81
Period size: 23 Copynumber: 2.0 Consensus size: 23
84292 TATCTATTTT
84302 ATTATATAAGCGATACCTAATAC
1 ATTATATAAGCGATACCTAATAC
*
84325 ATTATATAAGCGCTACCTAATA
1 ATTATATAAGCGATACCTAATA
84347 TGTTATTATA
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
23 21 1.00
ACGTcount: A:0.42, C:0.18, G:0.09, T:0.31
Consensus pattern (23 bp):
ATTATATAAGCGATACCTAATAC
Found at i:84773 original size:19 final size:20
Alignment explanation
Indices: 84734--84806 Score: 71
Period size: 20 Copynumber: 3.7 Consensus size: 20
84724 GACCAACAAA
*
84734 TTCGCAACGCG-ATCTCAAAT
1 TTCGCAACGCGAAT-TCCAAT
84754 TT-GCAACGCGAATTCCAAT
1 TTCGCAACGCGAATTCCAAT
* * *
84773 TTCACAAC-CCAGTTTCCAAT
1 TTCGCAACGCGA-ATTCCAAT
84793 TTCGCAACGCGAAT
1 TTCGCAACGCGAAT
84807 ATGTAAATCG
Statistics
Matches: 42, Mismatches: 7, Indels: 8
0.74 0.12 0.14
Matches are distributed among these distances:
19 17 0.40
20 23 0.55
21 2 0.05
ACGTcount: A:0.30, C:0.30, G:0.14, T:0.26
Consensus pattern (20 bp):
TTCGCAACGCGAATTCCAAT
Found at i:84851 original size:21 final size:21
Alignment explanation
Indices: 84814--84919 Score: 151
Period size: 21 Copynumber: 5.1 Consensus size: 21
84804 AATATGTAAA
* *
84814 TCGCATTGCGATTTTCCAAAT
1 TCGCGTTGCGATATTCCAAAT
**
84835 TCGCGTTGTTATATTCCAAAT
1 TCGCGTTGCGATATTCCAAAT
**
84856 TCGCGTTGTTATATTCCAAAT
1 TCGCGTTGCGATATTCCAAAT
84877 TCGCGTTGCGATATTCCAAAT
1 TCGCGTTGCGATATTCCAAAT
84898 TCGCGTTGCGATATT-CAAAT
1 TCGCGTTGCGATATTCCAAAT
84918 TC
1 TC
84920 TCAACGCAAA
Statistics
Matches: 79, Mismatches: 6, Indels: 1
0.92 0.07 0.01
Matches are distributed among these distances:
20 7 0.09
21 72 0.91
ACGTcount: A:0.24, C:0.22, G:0.16, T:0.39
Consensus pattern (21 bp):
TCGCGTTGCGATATTCCAAAT
Found at i:84935 original size:20 final size:20
Alignment explanation
Indices: 84912--84996 Score: 100
Period size: 20 Copynumber: 4.3 Consensus size: 20
84902 GTTGCGATAT
* *
84912 TCAAATTCTCAACGCAAAAG
1 TCAAATTCGCAACGCGAAAG
**
84932 TCAAATTCGCAATACGAAAG
1 TCAAATTCGCAACGCGAAAG
* **
84952 TCAAATTCGCAAC-TGAATT
1 TCAAATTCGCAACGCGAAAG
84971 TCAAATTCGCAACGCGAAAG
1 TCAAATTCGCAACGCGAAAG
84991 TCAAAT
1 TCAAAT
84997 ATTTTTACGC
Statistics
Matches: 53, Mismatches: 11, Indels: 2
0.80 0.17 0.03
Matches are distributed among these distances:
19 16 0.30
20 37 0.70
ACGTcount: A:0.42, C:0.22, G:0.13, T:0.22
Consensus pattern (20 bp):
TCAAATTCGCAACGCGAAAG
Found at i:85154 original size:22 final size:22
Alignment explanation
Indices: 85124--85171 Score: 69
Period size: 22 Copynumber: 2.2 Consensus size: 22
85114 CTACGGCGAC
*
85124 ATCCGTCCCCATCTCCGACAAA
1 ATCCATCCCCATCTCCGACAAA
* *
85146 ATCCATCCCCATTTCCGACGAA
1 ATCCATCCCCATCTCCGACAAA
85168 ATCC
1 ATCC
85172 GTCTATCTCC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
22 23 1.00
ACGTcount: A:0.27, C:0.44, G:0.08, T:0.21
Consensus pattern (22 bp):
ATCCATCCCCATCTCCGACAAA
Found at i:85397 original size:13 final size:13
Alignment explanation
Indices: 85379--85410 Score: 64
Period size: 13 Copynumber: 2.5 Consensus size: 13
85369 AGTATTTGTC
85379 TTTGTTTTGTCTT
1 TTTGTTTTGTCTT
85392 TTTGTTTTGTCTT
1 TTTGTTTTGTCTT
85405 TTTGTT
1 TTTGTT
85411 GAAGAAACCC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 19 1.00
ACGTcount: A:0.00, C:0.06, G:0.16, T:0.78
Consensus pattern (13 bp):
TTTGTTTTGTCTT
Found at i:85472 original size:20 final size:20
Alignment explanation
Indices: 85443--85521 Score: 115
Period size: 20 Copynumber: 4.0 Consensus size: 20
85433 CCAAATTCGT
*
85443 AACACAAAAATGAAAATCGC
1 AACACGAAAATGAAAATCGC
*
85463 AACACGAAAATGAAAATCTC
1 AACACGAAAATGAAAATCGC
*
85483 AACGCGAAAATGAAAATCGC
1 AACACGAAAATGAAAATCGC
*
85503 AACGCG-AAATGAAAATCGC
1 AACACGAAAATGAAAATCGC
85522 GTTGCGAATT
Statistics
Matches: 55, Mismatches: 4, Indels: 1
0.92 0.07 0.02
Matches are distributed among these distances:
19 13 0.24
20 42 0.76
ACGTcount: A:0.53, C:0.20, G:0.15, T:0.11
Consensus pattern (20 bp):
AACACGAAAATGAAAATCGC
Found at i:87915 original size:14 final size:14
Alignment explanation
Indices: 87896--87935 Score: 53
Period size: 14 Copynumber: 2.9 Consensus size: 14
87886 TTTTGATTAA
87896 TTGATTTGTAAAAG
1 TTGATTTGTAAAAG
** *
87910 TTGATTTGTTTAAT
1 TTGATTTGTAAAAG
87924 TTGATTTGTAAA
1 TTGATTTGTAAA
87936 TAAGAATTAT
Statistics
Matches: 21, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
14 21 1.00
ACGTcount: A:0.30, C:0.00, G:0.17, T:0.53
Consensus pattern (14 bp):
TTGATTTGTAAAAG
Found at i:87928 original size:61 final size:66
Alignment explanation
Indices: 87845--87984 Score: 157
Period size: 68 Copynumber: 2.2 Consensus size: 66
87835 TTTTACATTG
*
87845 AAAGTTAATTTGTTACAATTGATGAGGAAATAAG-A-T-TTA-TTTT-TTGATTAATTGATTTGT
1 AAAGTTGATTTGTTACAATTGATGAGGAAATAAGAATTATTATTTTTCTTGATTAATTGATTTGT
87905 A
66 A
* ** * *
87906 AAAGTTGATTTGTTTA-ATTTGATTTGTAAATAAGAATTATTATTTTTTGCTTGTTTAATTGATT
1 AAAGTTGATTTG-TTACAATTGATGAGGAAATAAGAATTATTA-TTTTT-CTTGATTAATTGATT
87970 TGTA
63 TGTA
87974 AAAGTTGATTT
1 AAAGTTGATTT
87985 ATTGTTTCTA
Statistics
Matches: 65, Mismatches: 6, Indels: 9
0.81 0.08 0.11
Matches are distributed among these distances:
61 25 0.38
62 4 0.06
63 1 0.02
64 3 0.05
66 4 0.06
68 28 0.43
ACGTcount: A:0.33, C:0.01, G:0.16, T:0.50
Consensus pattern (66 bp):
AAAGTTGATTTGTTACAATTGATGAGGAAATAAGAATTATTATTTTTCTTGATTAATTGATTTGT
A
Found at i:88072 original size:20 final size:20
Alignment explanation
Indices: 88046--88103 Score: 98
Period size: 20 Copynumber: 2.9 Consensus size: 20
88036 GTTGAAGGTA
*
88046 CAAATTCGTAACGCGAAAGT
1 CAAATTCGCAACGCGAAAGT
*
88066 TAAATTCGCAACGCGAAAGT
1 CAAATTCGCAACGCGAAAGT
88086 CAAATTCGCAACGCGAAA
1 CAAATTCGCAACGCGAAA
88104 TAAGCGTTGC
Statistics
Matches: 35, Mismatches: 3, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
20 35 1.00
ACGTcount: A:0.41, C:0.22, G:0.19, T:0.17
Consensus pattern (20 bp):
CAAATTCGCAACGCGAAAGT
Found at i:88551 original size:18 final size:18
Alignment explanation
Indices: 88528--88563 Score: 54
Period size: 18 Copynumber: 2.0 Consensus size: 18
88518 AAACCGGTTG
* *
88528 TGATTGGGATTTTGATTT
1 TGATTGCGATTATGATTT
88546 TGATTGCGATTATGATTT
1 TGATTGCGATTATGATTT
88564 CCTTTTGCTT
Statistics
Matches: 16, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
18 16 1.00
ACGTcount: A:0.19, C:0.03, G:0.25, T:0.53
Consensus pattern (18 bp):
TGATTGCGATTATGATTT
Found at i:90867 original size:24 final size:24
Alignment explanation
Indices: 90833--90886 Score: 90
Period size: 24 Copynumber: 2.2 Consensus size: 24
90823 CCATCACATC
90833 ATCAAAATCTGAGTATTGACCAAG
1 ATCAAAATCTGAGTATTGACCAAG
* *
90857 ATCAAAGTCTGGGTATTGACCAAG
1 ATCAAAATCTGAGTATTGACCAAG
90881 ATCAAA
1 ATCAAA
90887 TTTCGAATAC
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
24 28 1.00
ACGTcount: A:0.41, C:0.17, G:0.19, T:0.24
Consensus pattern (24 bp):
ATCAAAATCTGAGTATTGACCAAG
Found at i:93188 original size:33 final size:33
Alignment explanation
Indices: 93151--93215 Score: 85
Period size: 33 Copynumber: 2.0 Consensus size: 33
93141 AACACAATCA
* * *
93151 TCAATTATATTTTAAACCCCAAAATCTAAAATT
1 TCAATTACATTCTAAACCCCAAAATCCAAAATT
* *
93184 TCAATTACATTCTAAACCTCAAATTCCAAAAT
1 TCAATTACATTCTAAACCCCAAAATCCAAAAT
93216 ACTTCATTAC
Statistics
Matches: 27, Mismatches: 5, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
33 27 1.00
ACGTcount: A:0.45, C:0.22, G:0.00, T:0.34
Consensus pattern (33 bp):
TCAATTACATTCTAAACCCCAAAATCCAAAATT
Found at i:93624 original size:147 final size:148
Alignment explanation
Indices: 93404--93684 Score: 451
Period size: 147 Copynumber: 1.9 Consensus size: 148
93394 AATTCAGTTT
* *
93404 AAATAATTGTCTCGAAATTTTTCGATTTGAGTTTATAAAATTTAAAATCAAGTCAAATTGAATTG
1 AAATAATTGACTCGAAATTTTTCAATTTGAGTTTATAAAATTTAAAATCAAGTCAAATTGAATTG
* * *
93469 AATTTTTGAGTTTTTGTTTAAATTTAATTATAAATATTTATCATATTATAATATTATTTGATTCT
66 AATTTTTGAGTTTTTGTTTAAAATTAATTATAAATATTTATAATACTATAATATTATTTGATTCT
93534 AATTCAGTTCAGTTTATA
131 AATTCAGTTCAGTTTATA
* **
93552 AAATAGTTGACTCGAAATTTTTTTCAATTTGAG-TT-TAAAATTT-AAATCAAGTCGCATTGAAT
1 AAATAATTGACTCGAAA--TTTTTCAATTTGAGTTTATAAAATTTAAAATCAAGTCAAATTGAAT
93614 TGAATTTTTGAGTTTTTGTTTAAAATTAATTATAAATATTTATAATACTATAATATTATTTGATT
64 TGAATTTTTGAGTTTTTGTTTAAAATTAATTATAAATATTTATAATACTATAATATTATTTGATT
93679 CTAATT
129 CTAATT
93685 TAATAATTTT
Statistics
Matches: 123, Mismatches: 8, Indels: 5
0.90 0.06 0.04
Matches are distributed among these distances:
147 85 0.69
148 23 0.19
149 2 0.02
150 13 0.11
ACGTcount: A:0.37, C:0.06, G:0.10, T:0.48
Consensus pattern (148 bp):
AAATAATTGACTCGAAATTTTTCAATTTGAGTTTATAAAATTTAAAATCAAGTCAAATTGAATTG
AATTTTTGAGTTTTTGTTTAAAATTAATTATAAATATTTATAATACTATAATATTATTTGATTCT
AATTCAGTTCAGTTTATA
Found at i:94138 original size:64 final size:64
Alignment explanation
Indices: 93992--94146 Score: 149
Period size: 64 Copynumber: 2.4 Consensus size: 64
93982 GTTTTAATTG
* * *
93992 AACATCGAATGAC-TTTTATGTACCGATGCACATACCATGCATCGATGCACTCCATATATATTAA
1 AACATCGAA-AACATTTTATGCACCGATGCACATACCATGCATCGATGCACTCCAGATATATTAA
*** * *
94056 AACATCGAATTGATTTTATGCACCGATGCACA-AGCCATGCATCGATGCAC-CCAGGCT-TTTTC
1 AACATCGAAAACATTTTATGCACCGATGCACATA-CCATGCATCGATGCACTCCA-GATATATT-
94118 AA
63 AA
*
94120 AACATC-AAAACATATTTATGCATCGAT
1 AACATCGAAAACAT-TTTATGCACCGAT
94147 TCACTATCAG
Statistics
Matches: 75, Mismatches: 11, Indels: 10
0.78 0.11 0.10
Matches are distributed among these distances:
63 11 0.15
64 64 0.85
ACGTcount: A:0.34, C:0.24, G:0.14, T:0.28
Consensus pattern (64 bp):
AACATCGAAAACATTTTATGCACCGATGCACATACCATGCATCGATGCACTCCAGATATATTAA
Found at i:94396 original size:9 final size:9
Alignment explanation
Indices: 94370--94410 Score: 55
Period size: 9 Copynumber: 4.3 Consensus size: 9
94360 TTAATTAACA
*
94370 AGAATCAAC
1 AGAATCAAG
94379 AGAATCAAG
1 AGAATCAAG
94388 AGAATCAAGAG
1 AGAATC-A-AG
94399 AGAATCAAG
1 AGAATCAAG
94408 AGA
1 AGA
94411 GAATCAAAGA
Statistics
Matches: 29, Mismatches: 1, Indels: 4
0.85 0.03 0.12
Matches are distributed among these distances:
9 19 0.66
10 2 0.07
11 8 0.28
ACGTcount: A:0.56, C:0.12, G:0.22, T:0.10
Consensus pattern (9 bp):
AGAATCAAG
Found at i:94402 original size:11 final size:11
Alignment explanation
Indices: 94386--94423 Score: 69
Period size: 11 Copynumber: 3.5 Consensus size: 11
94376 AACAGAATCA
94386 AGAGAATCAAG
1 AGAGAATCAAG
94397 AGAGAATCAAG
1 AGAGAATCAAG
94408 AGAGAATCAA-
1 AGAGAATCAAG
94418 AGAGAA
1 AGAGAA
94424 AACATCAAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
10 6 0.22
11 21 0.78
ACGTcount: A:0.58, C:0.08, G:0.26, T:0.08
Consensus pattern (11 bp):
AGAGAATCAAG
Found at i:94404 original size:20 final size:21
Alignment explanation
Indices: 94370--94423 Score: 69
Period size: 22 Copynumber: 2.7 Consensus size: 21
94360 TTAATTAACA
*
94370 AGAATC-AACAGAATC-A-AG
1 AGAATCAAAGAGAATCAAGAG
94388 AGAATCAAGAGAGAATCAAGAG
1 AGAATCAA-AGAGAATCAAGAG
94410 AGAATCAAAGAGAA
1 AGAATCAAAGAGAA
94424 AACATCAAAC
Statistics
Matches: 31, Mismatches: 1, Indels: 5
0.84 0.03 0.14
Matches are distributed among these distances:
18 6 0.19
19 1 0.03
20 7 0.23
21 7 0.23
22 10 0.32
ACGTcount: A:0.57, C:0.11, G:0.22, T:0.09
Consensus pattern (21 bp):
AGAATCAAAGAGAATCAAGAG
Found at i:105465 original size:17 final size:16
Alignment explanation
Indices: 105443--105484 Score: 57
Period size: 17 Copynumber: 2.5 Consensus size: 16
105433 AGTGAATAAT
105443 AAATTTGTGAATAGTAA
1 AAATTTGTG-ATAGTAA
105460 AAATTTTGTGATAGTAA
1 AAA-TTTGTGATAGTAA
*
105477 AATTTTGT
1 AAATTTGT
105485 CGGTGATAAG
Statistics
Matches: 23, Mismatches: 1, Indels: 3
0.85 0.04 0.11
Matches are distributed among these distances:
16 5 0.22
17 12 0.52
18 6 0.26
ACGTcount: A:0.40, C:0.00, G:0.17, T:0.43
Consensus pattern (16 bp):
AAATTTGTGATAGTAA
Found at i:105480 original size:16 final size:18
Alignment explanation
Indices: 105446--105484 Score: 64
Period size: 16 Copynumber: 2.3 Consensus size: 18
105436 GAATAATAAA
105446 TTTGTGAATAGTAAAAAT
1 TTTGTGAATAGTAAAAAT
105464 TTTGTG-ATAGT-AAAAT
1 TTTGTGAATAGTAAAAAT
105480 TTTGT
1 TTTGT
105485 CGGTGATAAG
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
16 10 0.48
17 5 0.24
18 6 0.29
ACGTcount: A:0.36, C:0.00, G:0.18, T:0.46
Consensus pattern (18 bp):
TTTGTGAATAGTAAAAAT
Done.