Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006613.1 Hibiscus syriacus cultivar Beakdansim tig00016229_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  70009

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4682--4727
22
2.1
21
84
4
56
15
10
4
69
1.32
11206--11260
25
2.3
23
85
11
76
18
5
3
72
1.18
17518--17569
25
2.2
25
86
6
72
19
5
3
71
1.22
23937--23988
25
2.2
24
82
6
61
17
9
3
69
1.31
24670--24703
16
2.1
16
100
0
68
41
0
11
47
1.40
27194--27245
22
2.4
22
90
0
77
34
21
19
25
1.96
34215--34261
24
2.0
24
86
0
67
27
17
25
29
1.97
40718--40782
32
2.0
32
100
0
130
41
12
27
18
1.86
45838--45871
17
2.1
16
88
5
50
14
8
0
76
1.01
52229--52270
20
2.2
20
83
12
52
19
16
0
64
1.30
69404--69718
53
5.9
53
83
5
361
31
18
18
31
1.95
69404--69718
105
3.0
106
82
8
379
31
18
18
31
1.95

Tables:   1

The End!