Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006619.1 Hibiscus syriacus cultivar Beakdansim tig00016259_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  141007

Tables:   1   

This is table  1  of  1  ( 41 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
478--822
52
6.6
54
81
5
323
36
19
17
27
1.94
6157--6218
21
3.0
21
92
0
106
32
12
17
37
1.88
9743--10075
132
2.5
132
84
0
425
30
16
21
31
1.95
21088--21151
35
1.9
34
84
9
87
48
6
17
28
1.71
25036--25116
22
3.8
22
77
9
87
24
27
24
23
2.00
26827--27159
165
2.0
165
95
2
607
38
5
19
36
1.75
29629--29666
18
2.2
18
85
4
51
47
5
0
47
1.24
29989--30018
5
5.8
5
92
7
51
76
0
0
23
0.78
31741--31784
7
6.1
7
82
12
54
84
0
0
15
0.63
31741--31784
21
2.2
20
95
4
79
84
0
0
15
0.63
46730--46758
9
3.0
10
90
10
51
79
10
0
10
0.94
55234--55285
19
2.6
21
90
6
81
46
7
13
32
1.72
58588--58649
23
2.6
23
82
17
65
8
17
4
69
1.31
58628--58659
17
1.9
17
93
6
57
0
15
6
78
0.95
59379--59430
19
2.6
21
90
6
81
46
7
13
32
1.72
62085--62273
105
1.8
103
85
4
263
39
12
12
35
1.80
63706--63744
7
5.6
7
93
0
69
53
0
2
43
1.14
63852--63876
13
1.9
13
100
0
50
32
16
0
52
1.44
70649--70940
46
6.3
46
90
3
446
23
21
10
44
1.83
70687--70908
20
9.5
26
69
22
170
22
22
10
44
1.83
71314--71365
22
2.5
21
84
6
70
28
17
15
38
1.90
71313--71553
95
2.6
95
80
5
274
25
22
15
36
1.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
79298--79336
18
2.2
18
86
9
53
82
2
12
2
0.89
80022--80078
10
5.4
10
83
10
60
84
5
8
1
0.84
81431--81469
14
2.6
15
84
12
53
46
0
5
48
1.24
81575--81612
20
1.9
20
100
0
76
26
10
18
44
1.82
81662--81692
16
1.9
16
100
0
62
32
6
9
51
1.60
83723--83771
23
2.2
22
86
10
73
44
8
4
42
1.53
83736--83877
36
4.0
36
84
7
202
39
11
5
43
1.64
83740--83878
71
2.0
69
92
7
235
39
12
5
43
1.64
87839--87995
65
2.4
65
83
2
190
31
16
22
29
1.96
87976--88040
34
1.9
34
93
0
112
32
13
27
26
1.94
88407--88450
22
2.0
22
90
0
70
29
27
0
43
1.55
90614--90690
23
3.5
22
80
7
93
27
20
25
25
1.99
98646--98776
65
2.0
65
98
0
253
20
25
3
49
1.66
99703--99814
56
2.0
56
94
0
197
43
12
20
23
1.85
122985--123151
63
2.7
63
90
1
246
20
28
8
42
1.81
125060--125099
21
1.9
21
89
0
62
27
32
20
20
1.97
125060--125114
21
2.6
21
82
5
58
25
34
21
18
1.96
135564--135601
20
1.9
20
94
0
67
31
18
7
42
1.79
136091--136132
16
2.6
16
96
0
75
28
14
11
45
1.80

Tables:   1

The End!