Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000662.1 Hibiscus syriacus cultivar Beakdansim tig00001291_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  59711

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--443
9
9.6
9
75
15
67
45
0
0
54
0.99
351--437
10
9.0
10
77
18
78
43
0
0
56
0.99
363--437
40
1.9
38
84
15
100
42
0
0
57
0.98
374--437
19
3.8
18
73
26
68
39
0
0
60
0.97
494--556
26
2.4
25
77
15
65
47
1
1
49
1.20
576--621
23
2.0
23
86
4
65
52
2
2
43
1.25
11515--11546
2
16.0
2
100
0
64
50
0
0
50
1.00
11900--11944
20
2.3
20
84
3
56
60
13
6
20
1.55
13570--13606
20
2.0
20
89
10
60
21
16
16
45
1.84
21661--21729
23
3.0
22
76
4
66
26
24
24
24
2.00
22433--22470
20
1.9
20
88
0
58
10
31
34
23
1.89
22498--22540
21
2.0
21
90
0
68
16
23
27
32
1.96
28576--28644
23
3.0
22
78
4
66
27
26
23
23
2.00
28660--28877
103
2.1
103
98
0
418
37
24
13
24
1.91
29417--29458
21
2.0
21
90
0
66
16
19
28
35
1.93
34604--34633
14
2.1
15
93
6
53
56
0
0
43
0.99
44014--44128
60
1.9
60
83
3
151
41
13
9
35
1.76

Tables:   1

The End!