Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006621.1 Hibiscus syriacus cultivar Beakdansim tig00016262_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  63684

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6326--6368
23
1.9
21
81
13
50
32
18
11
37
1.87
13764--13823
22
2.6
23
79
12
70
68
8
15
8
1.38
13807--13833
14
1.9
14
100
0
54
85
0
14
0
0.61
17641--17692
12
4.4
12
80
2
61
86
7
3
1
0.76
17649--17699
22
2.2
22
86
10
66
82
11
5
0
0.83
22632--22812
91
2.0
91
84
4
240
22
27
21
28
1.99
33897--33976
35
2.2
37
88
4
119
30
37
5
27
1.78
41325--41400
35
2.1
37
90
4
120
31
36
3
27
1.75
41843--41889
14
3.1
15
75
12
51
70
6
19
4
1.26
45344--45419
35
2.1
37
87
4
111
31
35
3
28
1.76
49356--49435
35
2.2
37
88
4
119
31
36
3
28
1.75
54437--54470
13
2.6
13
100
0
68
20
0
52
26
1.46
58394--58418
12
2.1
12
100
0
50
84
8
8
0
0.79
58621--58667
16
2.9
16
75
15
51
14
19
0
65
1.26

Tables:   1

The End!