Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006623.1 Hibiscus syriacus cultivar Beakdansim tig00016273_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62834

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
326--373
17
2.8
16
82
17
53
20
4
0
75
0.97
12193--12240
13
3.8
13
76
15
55
29
2
43
25
1.66
12195--12263
25
2.8
25
82
4
88
30
2
42
24
1.69
16180--16297
36
3.3
35
85
2
155
32
0
36
30
1.64
24137--24174
12
3.0
13
84
7
60
92
7
0
0
0.40
24127--24174
15
3.1
15
93
3
78
89
8
2
0
0.56
24127--24174
1
48.0
1
80
0
51
89
8
2
0
0.56
54219--54266
21
2.3
21
96
0
87
22
18
33
25
1.97
54333--54439
45
2.3
46
85
4
137
30
18
22
28
1.97
60540--60587
24
2.0
24
100
0
96
20
29
25
25
1.99

Tables:   1

The End!