Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006628.1 Hibiscus syriacus cultivar Beakdansim tig00016286_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  65204

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5578--5630
22
2.4
22
96
0
97
30
20
16
32
1.95
14726--14802
32
2.5
31
81
8
93
31
29
24
14
1.94
16136--16172
18
2.1
19
85
10
51
21
24
10
43
1.84
16517--16585
30
2.3
30
79
0
75
34
20
24
20
1.96
16559--16610
23
2.3
23
96
0
95
28
21
28
21
1.98
17373--17527
65
2.4
64
75
13
145
34
7
9
48
1.64
17465--17527
32
2.0
32
83
0
81
34
4
7
52
1.52
21428--21467
19
2.1
19
85
0
53
47
7
2
42
1.45
21194--22036
418
2.0
414
85
5
1137
44
8
8
39
1.65
21848--22290
181
2.5
178
79
6
432
38
12
9
40
1.75
26069--26143
30
2.5
30
75
0
78
29
14
28
28
1.95
28534--28576
13
3.2
13
83
3
50
30
23
18
27
1.98
32219--32881
330
2.0
330
99
0
1317
21
21
20
35
1.96
59478--59524
25
1.9
24
83
12
60
76
6
4
12
1.12
59702--59760
5
11.8
5
80
8
59
77
0
1
20
0.85
61325--61527
110
1.9
109
86
1
289
23
19
21
35
1.95
62268--62363
50
1.9
49
85
10
133
36
3
20
39
1.69
62365--62430
21
2.8
25
80
19
97
39
13
24
22
1.90
62444--62626
65
2.7
67
79
6
194
39
12
18
30
1.87
62565--62734
37
4.8
37
69
19
119
37
13
20
28
1.91
62493--62734
104
2.3
104
92
1
398
37
12
19
30
1.89
64147--64284
69
2.0
69
92
0
231
23
14
22
39
1.91

Tables:   1

The End!