Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000663.1 Hibiscus syriacus cultivar Beakdansim tig00001292_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73931

Tables:   1   

This is table  1  of  1  ( 36 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3513--3584
29
2.5
29
97
0
135
40
8
15
36
1.77
6537--6582
21
2.2
21
100
0
92
17
19
21
41
1.90
21241--21268
2
14.0
2
100
0
56
0
50
0
50
1.00
31490--31531
15
2.7
15
82
10
50
47
0
0
52
1.00
31490--31537
12
4.4
12
77
17
52
47
0
0
52
1.00
32129--32201
28
2.8
26
74
14
69
73
2
9
13
1.18
32934--32967
17
2.0
17
88
11
52
2
0
20
76
0.92
33627--33672
18
2.5
19
75
10
51
76
4
6
13
1.14
33738--33816
33
2.5
33
85
8
101
44
6
6
43
1.55
33684--33818
33
4.2
33
67
21
88
46
8
4
40
1.55
33743--34038
38
8.3
38
76
11
215
44
6
5
42
1.54
33700--34037
38
9.5
37
74
14
164
44
7
4
42
1.54
33824--34101
38
7.4
38
76
13
206
44
6
5
44
1.50
33842--34044
75
2.7
75
79
8
229
42
6
6
44
1.55
34702--35536
165
5.0
165
90
2
1221
23
21
25
29
1.99
34772--35536
85
9.2
84
84
4
946
23
21
26
29
1.99
34702--35536
335
2.5
329
87
3
1246
23
21
25
29
1.99
38865--38909
19
2.4
19
85
3
65
64
11
13
11
1.50
41455--41488
17
2.0
17
88
11
52
2
0
20
76
0.92
42148--42193
18
2.5
19
75
10
51
76
4
6
13
1.14
42259--42337
33
2.5
33
85
8
101
44
6
6
43
1.55
42205--42339
33
4.2
33
67
21
88
46
8
4
40
1.55
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42257--42560
38
8.5
34
73
17
128
44
6
5
43
1.53
42205--42393
98
1.9
96
82
7
229
46
8
3
41
1.52
42345--42566
38
5.9
37
79
8
184
43
6
5
44
1.53
42221--42546
75
4.6
76
72
14
234
45
7
4
42
1.54
42268--42623
75
4.9
73
73
14
242
44
6
5
43
1.52
55418--55457
19
2.0
19
85
9
53
30
40
0
30
1.57
61382--61421
21
1.9
21
85
10
55
35
10
2
52
1.48
63250--63298
19
2.7
17
84
9
53
26
20
28
24
1.99
63279--63397
56
2.1
57
84
7
154
26
16
24
32
1.96
64159--64199
21
2.0
21
95
0
73
26
24
17
31
1.97
67270--67316
23
2.0
24
91
4
78
61
2
0
36
1.08
72669--72724
21
2.7
20
82
15
69
67
0
0
32
0.91
72677--72725
25
2.0
24
88
4
71
65
0
0
34
0.93
73743--73777
16
2.1
18
89
10
56
20
20
11
48
1.79

Tables:   1

The End!