Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006632.1 Hibiscus syriacus cultivar Beakdansim tig00016299_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50331

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3790--3818
14
2.1
14
93
6
51
6
0
10
82
0.83
8804--8884
25
3.0
27
73
23
73
77
3
11
7
1.09
11112--11214
42
2.5
42
80
4
111
29
19
19
32
1.96
12781--12812
16
2.0
16
93
0
55
12
3
12
71
1.25
13227--13322
42
2.3
42
94
1
165
30
5
8
56
1.51
18926--19000
22
3.4
22
81
7
98
34
14
22
28
1.94
33392--33637
122
2.0
122
95
0
447
28
16
22
32
1.96
39926--39962
12
2.7
15
76
24
53
5
35
5
54
1.47
39930--39962
12
2.8
12
100
0
66
6
33
6
54
1.50
42699--42732
17
2.1
17
88
5
52
64
5
14
14
1.46
44902--44940
16
2.5
16
87
4
53
33
23
7
35
1.83
47996--48052
26
2.1
28
80
6
64
61
3
0
35
1.13
49504--49533
15
2.0
15
93
0
51
30
3
13
53
1.56
49995--50030
11
3.4
11
96
3
65
63
8
19
8
1.47

Tables:   1

The End!