Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006635.1 Hibiscus syriacus cultivar Beakdansim tig00016323_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  68859

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5883--5917
17
2.1
17
89
5
54
28
11
5
54
1.59
7263--7354
28
3.3
28
100
0
184
34
9
15
40
1.80
9938--9975
17
2.2
18
90
4
60
34
23
23
18
1.96
14483--14518
17
2.1
17
100
0
72
36
25
22
16
1.94
23404--23444
17
2.4
17
87
4
64
39
24
19
17
1.92
26425--26465
17
2.4
17
87
4
64
39
24
19
17
1.92
31015--31055
17
2.4
17
87
4
64
39
24
19
17
1.92
55575--55616
20
2.3
18
88
12
59
52
11
9
26
1.68
56999--57073
23
3.3
22
68
15
62
38
8
21
32
1.82
56973--57085
46
2.5
46
91
4
178
41
6
19
32
1.76
57239--57329
38
2.4
38
88
0
128
25
25
27
21
2.00
57483--57524
20
2.0
21
90
4
68
42
7
9
40
1.65

Tables:   1

The End!