Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006649.1 Hibiscus syriacus cultivar Beakdansim tig00016398_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30845

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5223--5265
14
3.1
14
83
3
52
88
6
0
4
0.63
6034--6807
105
7.4
105
98
0
1478
32
24
18
23
1.97
8178--8202
2
12.5
2
100
0
50
48
0
0
52
1.00
8249--8274
2
13.0
2
100
0
52
50
0
0
50
1.00
9655--9707
14
3.7
14
72
5
52
45
11
7
35
1.69
9630--9730
29
3.4
29
84
4
132
43
12
9
33
1.76
9980--10080
30
3.5
27
77
20
82
44
2
0
51
1.23
10127--10240
47
2.5
46
80
11
110
48
0
4
47
1.22
10156--10214
17
3.3
18
79
13
68
50
0
1
47
1.11
10360--10394
18
1.9
18
94
0
61
54
8
8
28
1.60
12389--12428
20
2.0
20
90
0
62
25
25
5
45
1.73
14875--14902
10
2.8
10
100
0
56
0
21
7
71
1.09
14929--14962
18
1.9
18
88
5
52
14
26
32
26
1.95
15284--15361
2
39.0
2
94
0
138
47
0
2
50
1.15

Tables:   1

The End!