Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006656.1 Hibiscus syriacus cultivar Beakdansim tig00016432_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61676

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20577--20661
24
3.7
23
68
14
68
29
24
25
20
1.99
26416--26462
17
2.8
17
93
0
76
25
27
12
34
1.92
27613--27655
23
1.9
22
90
4
68
74
2
0
23
0.93
33255--33475
121
1.8
121
99
0
433
27
25
10
36
1.89
41084--41134
20
2.5
20
75
6
50
27
21
13
37
1.91
45693--45725
3
10.7
3
93
6
57
36
0
0
63
0.95
47068--47132
11
5.6
11
73
20
53
29
4
3
63
1.30
47563--47601
2
20.5
2
84
10
55
51
0
0
48
1.00
47322--47621
148
2.0
146
84
8
387
39
6
5
48
1.52
53077--53172
7
13.7
7
93
6
160
72
0
27
0
0.84
56359--56539
75
2.4
75
81
0
200
32
17
22
28
1.96
58522--58828
76
4.3
74
73
10
262
28
20
20
30
1.98
58693--58749
21
2.8
21
91
2
89
31
31
19
17
1.95
58592--58864
136
2.0
137
94
0
476
29
22
20
27
1.98
58713--58996
118
2.4
118
87
2
412
30
21
20
28
1.98
59245--59299
3
18.7
3
84
3
76
38
1
0
60
1.08
60511--60548
19
2.0
19
85
10
51
39
5
0
55
1.23
60639--60688
22
2.3
21
80
16
57
30
6
2
62
1.31

Tables:   1

The End!