Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01006659.1 Hibiscus syriacus cultivar Beakdansim tig00016475_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60488

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3091--3133
21
2.0
23
86
9
63
13
2
25
58
1.48
4837--4881
16
2.8
16
82
3
54
55
0
0
44
0.99
5155--5207
23
2.3
23
86
0
79
13
20
15
50
1.76
5476--5503
14
2.0
14
100
0
56
21
0
21
57
1.41
17900--18115
115
1.9
116
90
3
346
35
5
6
53
1.47
18005--18071
28
2.4
28
80
11
68
25
7
4
62
1.40
21563--21604
22
2.0
22
85
4
59
54
2
0
42
1.13
28871--28907
18
2.1
18
89
0
56
24
13
0
62
1.31
30321--30396
36
2.1
36
97
0
143
31
10
14
43
1.79
30821--30845
12
2.1
12
100
0
50
16
24
44
16
1.86
35311--35386
36
2.1
36
97
0
143
31
10
14
43
1.79
38297--38332
19
1.9
18
94
5
63
27
8
0
63
1.23
38292--38333
18
2.4
17
84
11
57
28
7
2
61
1.35
38300--38342
19
2.3
18
80
7
50
32
4
0
62
1.15
38511--38649
46
3.0
46
100
0
278
23
25
17
33
1.96
47746--47785
21
1.9
21
89
0
62
27
17
17
37
1.92
47855--47891
18
2.1
18
94
0
65
21
18
32
27
1.97
50049--50116
35
1.9
35
85
5
93
22
23
22
32
1.98
56979--57052
20
3.7
20
85
0
103
24
22
21
31
1.99
57042--57112
20
3.5
20
90
0
115
22
15
21
40
1.90
57035--57111
40
1.9
41
94
2
138
22
14
19
44
1.86

Tables:   1

The End!