Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: VEPZ01000666.1 Hibiscus syriacus cultivar Beakdansim tig00001296_pilon, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53363

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
336--360
12
2.1
12
100
0
50
0
16
0
84
0.63
6981--7018
2
19.0
2
100
0
76
0
50
0
50
1.00
7355--7385
14
2.2
14
100
0
62
61
0
0
38
0.96
8312--8356
14
3.2
14
90
0
72
8
13
24
53
1.68
9620--9660
21
2.0
21
85
0
55
29
29
24
17
1.97
10516--10543
11
2.5
11
100
0
56
39
0
28
32
1.57
11024--11328
149
2.1
147
95
1
547
28
16
20
34
1.94
11304--11347
22
2.0
23
86
4
63
22
27
25
25
2.00
14611--14655
21
2.1
21
83
0
54
31
26
24
17
1.97
15528--15555
11
2.5
11
100
0
56
39
0
28
32
1.57
16243--16396
30
5.1
30
96
1
274
30
25
22
21
1.99
17105--17146
22
2.0
22
85
4
59
33
26
0
40
1.56
17594--17638
21
2.1
21
87
0
63
15
24
28
31
1.96
18713--19027
149
2.1
149
95
1
560
28
17
20
33
1.95
18995--19039
23
2.0
23
90
0
72
22
26
26
24
2.00
22325--22369
21
2.1
21
87
0
63
31
28
24
15
1.96
23246--23273
11
2.5
11
100
0
56
39
0
28
32
1.57
24754--24820
16
4.3
16
92
3
102
10
10
19
59
1.58
24752--24812
32
1.9
32
96
0
113
8
13
22
55
1.64
25262--25295
16
2.1
16
100
0
68
50
0
5
44
1.26
49175--49204
2
15.5
2
93
6
53
50
0
0
50
1.00

Tables:   1

The End!